Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0067 ATGGAAAGAGGAAGAAGAATGAATTATTATGCAGAAGATGGAACTGTAGATCTCAAAGGAAAACCAGTTCTCAAAGCTAAAACTGGTGGTTGGAAAGCTTGTTCTTTTCTTCTTGTTTACGAGGTGTTTGAAAGAATGACATACTATGGGATATCATCAAACTTGGTTCTGTATCTGACAAGGAAGCTTCACCAAGGCACTGTTACTGCTTCTGACAATGTCAACAATTGGGTTGGCACTATCTATATAACTCCTATATTAGGTGCCTATGTTGCTGATGCTCATCTTGGCCGCTATTGGACTTTTGTCATTTCCTCTGTTATCTATCTACTGGGTATGTGTCTGCTTACACTATCAGTTTCCCTTCCAAGTTTAAAGCCTCCTGAGTGCCATGAAATGGATGTGACAAAATGCAAGAAGGCAACCACACTACAGTTAGGTGTGTTCTATGGTGCACTATACATCTTAGCAGTGGGTGGTGGTGGAACCAAGCCCAACATTTCCACCATTGGTGCTGACCAATTTGATGATTTTGACCCCAAAGAGAAGGCACATAAACTCTCATTCTTTAACTGGTGGTTTTCCAGCATCTTCATTGGGACCCTTTTTTCATTCACAGTTCTAGTGTACATACAAGACAATGTGGGGTGGGCTCTTGGTTATGGTATTCCAACTATTGGGCTTGCTATAGCATTCATCACATTCCTGGCAGGCACACCCCTCTATAGACACAGATTGGCCTCAGGGAGTTCCTTCACTAGAATCGCCAGGGTTATAGTGGCTGCTGTGAGGAAAAGGAATGTGAATGCTACTATTGACTCTGCACAACTACATGAGCTTGATGTAGAAGAATACACAAATAAAGGGAAATTCAGGATCGAATCCACTGATACATTGAGGTTCCTCAACAAGGCTTGTGTGAGAACTAGTTCAAGTACTAGTGAGTGGATGCTGTGCACAGTTACTCAAGTAGAGGAAACTAAACAAATCCTAAGGATGATCCCCATCTGGGTTGCTACATTTATTCCAAGCACAATGCTTGCTCAGACAAACACCCTTTTTGTAAAGCAAGGAGTTACTCTTGATAGACACATTGGCAGATTCAACATTCCCCCTGCAAGTTTGATTGCATTCACATCTTTCACCATGCTTGTCTGTGTTGTACTCTATGACCGTATCTTTGTTAAGATTATGAAGAGATTCACCAAGAACCCCAGAGGGATCACTCTTCTTCAAAGAATGGGCATAGGAATCATGATCCACATAGTGACTATGATAGTAGCATCTTTGACTGAAAGATATAGACTTAAAGTGGCCAAGGAACATGGGGTAGTTCAAAATGGAGGACAAGTTCCTCTGAGCATATTCATTTTGGCTCCTCAATTCGTGCTGATGGGATTAGGTGAAGCCTTCTTAGAGGTTTCAAAAATAGAGTTCTTCTATGACCAAGCCCCGGAAAGCATGAAGAGCCTTGGAACTTCATATTCCATTACTACTGTTGGCATTGGGAGTTTCATCAGCTCTTTTCTTCTCTCCACAGTTTCACGCATCACTAAGAAAAATGGCCACAAAGGATGGATTTTGAACAACCTGAATGCTTCTCATCTTGATTACTACTATGCATTTTTCTCGGTTCTAAACTTTCTGAATTTCATCTTCTTCATGTTTGCTACAAAGTACTTTGTGTATAGAGCTGAAATTTCAGATTCTATTGATGTGCTTGCACAAGAACTGAAGGAGAAGAGATCCAATGTGTCAAACTAA 1764 0.4099 MERGRRMNYYAEDGTVDLKGKPVLKAKTGGWKACSFLLVYEVFERMTYYGISSNLVLYLTRKLHQGTVTASDNVNNWVGTIYITPILGAYVADAHLGRYWTFVISSVIYLLGMCLLTLSVSLPSLKPPECHEMDVTKCKKATTLQLGVFYGALYILAVGGGGTKPNISTIGADQFDDFDPKEKAHKLSFFNWWFSSIFIGTLFSFTVLVYIQDNVGWALGYGIPTIGLAIAFITFLAGTPLYRHRLASGSSFTRIARVIVAAVRKRNVNATIDSAQLHELDVEEYTNKGKFRIESTDTLRFLNKACVRTSSSTSEWMLCTVTQVEETKQILRMIPIWVATFIPSTMLAQTNTLFVKQGVTLDRHIGRFNIPPASLIAFTSFTMLVCVVLYDRIFVKIMKRFTKNPRGITLLQRMGIGIMIHIVTMIVASLTERYRLKVAKEHGVVQNGGQVPLSIFILAPQFVLMGLGEAFLEVSKIEFFYDQAPESMKSLGTSYSITTVGIGSFISSFLLSTVSRITKKNGHKGWILNNLNASHLDYYYAFFSVLNFLNFIFFMFATKYFVYRAEISDSIDVLAQELKEKRSNVSN* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0067 587 CDD MFS_NPF5 31 563 IPR044739 GO:0042937|GO:0042938|GO:0071916
Vra8g0067 587 SUPERFAMILY MFS general substrate transporter 27 559 IPR036259 -
Vra8g0067 587 Gene3D MFS general substrate transporter like domains 5 569 IPR036259 -
Vra8g0067 587 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 14 572 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vra8g0067 587 Pfam POT family 99 527 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vra8g0067 587 PANTHER PEPTIDE TRANSPORTER 14 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0067 Vra-Chr8 728679 733763 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0067 10 577 Organic Solute Cotransporters AT5G46040 64.386 0.0 741
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0067 - - gmx:100811610 1051.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g0067 8 728679 733763 Vra8g0067 8 728679 733763 ECH
Vra3g0209 3 2408414 2410661 Vra8g0067 8 728679 733763 PCT