Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0066 ATGGAAGAAGAAGAAGAAGAAGGAAGAAGAAGAAGAATGGTGAATGGTGATGATGATCATGATGAGTACACAGAAGATGGAACTGTCGATCTTAAAGGAAAACCCATTCTCAAATCCAAAACTGGTCGTTGGAAAGCTTGTTCCTTTGTTGTTGTGTATGAGATATTTGAGAGAATGGCATACTATGGAATATCATCAAACTTGATTCTTTATCTGACAAAGAAGCTTCACCAAGGAACTGTCACATCTTCAAACAATGTCACCAATTGGGTTGGCACCATTTGGATAACTCCCATCTTAGGAGCATATCTTGCTGATGCTCATCTTGGTCGCTATTGGACTTTCATTCTCTCCTCAATCATCTATTTCTTGGGTATGTGTCTACTCACACTATCAGTGTCCCTTCCAAGCCTAAAGCCACCAGAGTGCCATGAATTGGATTTGACAAAATGTGAAAAAGCTTCCACACTGCATCTAGCTGTGTTCTATGGTGCACTCTACACTTTGGCACTGGGAACAGGTGGAACCAAGCCCAACATTTCTACCATTGGTGCTGATCAATTTGATGAATATGACCCCAAAGAGAAGAAGTCCAAACTCTCCTTCTTCAATTGGTGGATGTTCAGCATCTTCATTGGAACCCTCTTTGCAAACTCTGTCTTAGTCTACATACAAGATAATGTCGGCTGGACTCTTGGCTATGCTCTTCCCACTCTTGGACTTGCAATTTCTGTAGTCATTTTTCTGGCAGGCACACCCTTTTACAGACACAAATTACCCACTGGGAGTCCATTCACTAAGATGGCTAAGGTCATGGTGGCTGCTATCAGAAAATGGAATACTCCTATTCCTACTGACACTAAACAACTCTATGAGCTTGATTTGGAAGAGTATGCCAAGAAAGGGAGAGTCAGAATTCATCCAACTCCAACCTTGAGGTTCCTGAACAAGGCTTGTGTGAAGACTGATTCAAGTGCAAGTGGGTGGAAACTAAGCCCTGTTACTCATGTAGAGGAGACTAAACAAATGCTGAGAATGATCCCTATCTGGATAGCCACCTTCATTCCTAGTGCAATGGTTGCACAGATAGGTACCCTTTTTGTGAAGCAGGGTATTACACTTGACAGAGGCATTGGTAGCTTCAATATCCCTCCTGCAAGTTTAAGCACATTTGTGACTCTATCCATGCTTATTTGTGTGGTGCTCTATGACCGTTTCTTTGTGAAAATCATGCAAAGGTTCACCAAGAACCCCAGAGGAATAACCCTTCTGCAAAGGGTTGGAATTGGCCTCATAATCCACATAGTGATCATGGTGATTGCATCTCTAACTGAAAGGTATAGACTTAGAGTGGCCAAGGAACATGGGTTGGTGGCAAATGGAGGAGAAGTTCCTCTCAGCATTTTCATCTTGCTTCCTCAATACATTCTTATGGGAACTGCTGATGCATTTCTAGAAGTTGCAAAAATTGAATTCTTCTATGACCAAGCCCCGGAAAGCATGAAGAGCCTTGGCACTTCCTATTCAATGACTGCATTAGGCATTGGGAATTTCCTAAGCACCTTTATTCTCTCGACAGTTTCACATGTCACCATGAAACATGGCCACCATGGATGGGTTTTGAACAACTTGAATGCTTCTCGTCTTGACTACTACTATGCACTTTTGGCCATACTCAACTTGCTGAACCTCGTGTTCTTCATGGTTGTGGCAAAGTTCTATGTTTACAAAGCTGAAATTTCAGATTCCATTGAAGTGCTTGGAGAAGAGCTCAGAGAAAAGACATCAAACCAAGTGATTCCAAGAGATTGA 1812 0.4216 MEEEEEEGRRRRMVNGDDDHDEYTEDGTVDLKGKPILKSKTGRWKACSFVVVYEIFERMAYYGISSNLILYLTKKLHQGTVTSSNNVTNWVGTIWITPILGAYLADAHLGRYWTFILSSIIYFLGMCLLTLSVSLPSLKPPECHELDLTKCEKASTLHLAVFYGALYTLALGTGGTKPNISTIGADQFDEYDPKEKKSKLSFFNWWMFSIFIGTLFANSVLVYIQDNVGWTLGYALPTLGLAISVVIFLAGTPFYRHKLPTGSPFTKMAKVMVAAIRKWNTPIPTDTKQLYELDLEEYAKKGRVRIHPTPTLRFLNKACVKTDSSASGWKLSPVTHVEETKQMLRMIPIWIATFIPSAMVAQIGTLFVKQGITLDRGIGSFNIPPASLSTFVTLSMLICVVLYDRFFVKIMQRFTKNPRGITLLQRVGIGLIIHIVIMVIASLTERYRLRVAKEHGLVANGGEVPLSIFILLPQYILMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTALGIGNFLSTFILSTVSHVTMKHGHHGWVLNNLNASRLDYYYALLAILNLLNLVFFMVVAKFYVYKAEISDSIEVLGEELREKTSNQVIPRD* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0066 603 CDD MFS_NPF5 44 576 IPR044739 GO:0042937|GO:0042938|GO:0071916
Vra8g0066 603 PANTHER PEPTIDE TRANSPORTER 27 586 - -
Vra8g0066 603 Gene3D MFS general substrate transporter like domains 15 582 IPR036259 -
Vra8g0066 603 MobiDBLite consensus disorder prediction 1 26 - -
Vra8g0066 603 SUPERFAMILY MFS general substrate transporter 32 572 IPR036259 -
Vra8g0066 603 Pfam POT family 112 540 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vra8g0066 603 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 27 586 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0066 Vra-Chr8 717068 720709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0066 21 590 Organic Solute Cotransporters AT5G46040 65.909 0.0 765
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0066 - - gmx:100813385 1025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0210 3 2411830 2414392 Vra8g0066 8 717068 720709 PCT