Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0210 ATGATGGGAGTGGAAGAAGAAGAAAAAGGGTTTGCAGGTAGTAGAAGAGAGAAGGATTACACCCAAGATGGCACAGTGGACCTCAATGGTAAACCAGTTTTAAGATCAAATACTGGAAGCTGGAGAGCTTCTTCCTTCATTGTAGGGTATGAAATGATTGAAAGAATGGCATACTATGGGATAGCATCAAACCTAGTATTGTATCTAACAAAGAAGCTTCATGAGGGCACTGTCAAATCTTCAAATCACGTGACCAACTGGGCTGGTGCAGTTTGGATCATGCCAGCTGCCGGAGCTTACATAGCCGATGCCTATCTTGGCCGATATTGGACTTTCGTTATAGCATCAGCCATTTACCTTCTGGGGATGTGTTTGTTGACGCTAGCAGTGTCACTACCAGGATTGAGACCACCAGCATGTGCTCCAGGAGTTGCAGACCAAGATTGCCCACAAGCATCCTCATTGCAAGTGGGAATTTTCTTCTTTGCCTTGTACATCATTGCAGCAGGCACAGGGGGGACCAAGCCCAACATTTCTACAATGGGAGCAGACCAATTTGACGAGTTTGAACCAAAAGAGAGGTCCCAAAAGCTTTCCTTCTACAATTGGTGGGTGTTCTATATTCTAATTGGAACCATTTCAGCCCAAACTCTCTTGGTTTACATACAAGACAGAGTTGGTTTTGGCCTTGGTTATGGGATCCCAACCATTGCTCTAGCCGTTTCAATATTCATGTTTCTGCTAGGAACTCCTCTTTATAGGCATAGATTACCCTCTGGCAGCCCTTTAACCAGAATGGTCCAGGTACTTGTGTCTGCACTGAGGAAGTGGAAGGTTCATGTCCCGGATGATTTAAATCAGCTACATGAGCTCAGCATGGAAGAGTATTATGCAAGTAAAGGGAGAACAAGAATTTATCACAGTTCTTCATTAAGATTCCTAGACAAAGCTGCAGTGAAGACAGGAGAAACATCACCATGGATGCTTTGTACTGTGACTCAAATTGAGGAAACCAAGCAAATGATGAAAATGGTTCCTATTTTGATCACTACGTGCATTCCAAGCACCATAATAGCTCAAACCACCACACTCTTCATCAGACAAGGCACCACACTAGACAGGAGAATGGGACCCCATTTTGAAATCCCTCCAGCATGTCTTATAGCTTTTGTGAACATCTTCATGCTGATAAGCGTTGTGATCTATGACCGTCTTTTCGTTCCTGCAATCCGGCACTACACCAAGAACCCCAGAGGGATCTCCTTGCTGCAGAGACTTGGAATTGGACTTGTGCTACATGTTATCATTATGCTCACTGCATGCTTTGTTGAGAGGAAGAGACTCAGTGTGGCAAGAGAAAATAACCTTTTAGGCCAGCTTGATAAAATTCCTCTAACCATTTTCATCCTCCTCCCTCAGTTTGCTTTTACAGGAATTGCCGACACCTTTGTTGATGTTGCCAAGTTGGAGTTCTTCTATGATCAAGCACCAGAAGCCATGAAAAGTTTGGGAACCTCATATTTCACAACCACCTTGAGCATTGGAAATTTTCTTAATAGTTTTCTGCTTTCAACTGTCGCTGATCTCACCCGCAAACATGGTCACAAGAGTTGGATTTTGGATAATCTAAATGCTTCCCGCTTAGATTATTATTATGCATTCTTGGCTCTTCTCAGTGCTATCAATTTCTTTTGCTTTGTGGCTGTTGCCAAATTTTACGTCTATAATGTTGATCAAACACAAATCAACAAGGACTTGGATATGAACACTACTTCACCTGAAGACAATACTGAAATAAGCCAAAGTACCACAACCAGATAA 1821 0.4278 MMGVEEEEKGFAGSRREKDYTQDGTVDLNGKPVLRSNTGSWRASSFIVGYEMIERMAYYGIASNLVLYLTKKLHEGTVKSSNHVTNWAGAVWIMPAAGAYIADAYLGRYWTFVIASAIYLLGMCLLTLAVSLPGLRPPACAPGVADQDCPQASSLQVGIFFFALYIIAAGTGGTKPNISTMGADQFDEFEPKERSQKLSFYNWWVFYILIGTISAQTLLVYIQDRVGFGLGYGIPTIALAVSIFMFLLGTPLYRHRLPSGSPLTRMVQVLVSALRKWKVHVPDDLNQLHELSMEEYYASKGRTRIYHSSSLRFLDKAAVKTGETSPWMLCTVTQIEETKQMMKMVPILITTCIPSTIIAQTTTLFIRQGTTLDRRMGPHFEIPPACLIAFVNIFMLISVVIYDRLFVPAIRHYTKNPRGISLLQRLGIGLVLHVIIMLTACFVERKRLSVARENNLLGQLDKIPLTIFILLPQFAFTGIADTFVDVAKLEFFYDQAPEAMKSLGTSYFTTTLSIGNFLNSFLLSTVADLTRKHGHKSWILDNLNASRLDYYYAFLALLSAINFFCFVAVAKFYVYNVDQTQINKDLDMNTTSPEDNTEISQSTTTR* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0210 606 MobiDBLite consensus disorder prediction 1 24 - -
Vra3g0210 606 PANTHER PEPTIDE TRANSPORTER 23 589 - -
Vra3g0210 606 CDD MFS_NPF5 41 575 IPR044739 GO:0042937|GO:0042938|GO:0071916
Vra3g0210 606 MobiDBLite consensus disorder prediction 586 606 - -
Vra3g0210 606 Pfam POT family 109 539 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vra3g0210 606 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 23 589 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vra3g0210 606 Gene3D MFS general substrate transporter like domains 12 582 IPR036259 -
Vra3g0210 606 SUPERFAMILY MFS general substrate transporter 34 573 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0210 Vra-Chr3 2411830 2414392 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0210 19 581 Organic Solute Cotransporters AT5G46040 58.865 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0210 - K14638 gmx:100787001 1038.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0210 3 2411830 2414392 Vra8g0066 8 717068 720709 PCT