Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3546 ATGAGGGTGTTTCCCAGGTTCAAGTTTCTGTCACGAGCAGTGCACGAGGAACACGAGGGTGAGCATGATGGGGAGAGAAACAGGGTTGACAATTACATCGGCCACCCCAATGAAGTTATTCTTATGGACGCTTCAGGAAACTCTGTCCTCACTCTTCGCCGCTCCAGGAAGCTGGGATTAGTAGATAGCTGGTTTGTGTATGAAGGGGAAAGAGGGAAGCAGAGTACGAGAAGTAAGTGGTGTAAATCGAATAACAGTCCAGTTTGTTGTGTAAGGAAGCGTGTGAATATTTTAGACGGCAAGCCCAAGGTTCAGGCCTACGTGTATCGTGTAGCATCGGACTCAGATAAACGACATGCGGCATTTACAGTTGAAGGTTCCTATGCACATAGGACATGTAAAGTGTTAGATGAGTGCAAGAAGGCTGTGGCTGAAATCAAGAGAAAGGAGGCCAATAGCAAAGACGTCTCTTTCGGGATAGAGATTTTTCAATTGGTTGTTCACCCTGGCTTTGATCCTAGCTTTGCCATGGCACTCGTTTTACTGCTGGATCAAATGTTTTCGTAA 567 0.4621 MRVFPRFKFLSRAVHEEHEGEHDGERNRVDNYIGHPNEVILMDASGNSVLTLRRSRKLGLVDSWFVYEGERGKQSTRSKWCKSNNSPVCCVRKRVNILDGKPKVQAYVYRVASDSDKRHAAFTVEGSYAHRTCKVLDECKKAVAEIKRKEANSKDVSFGIEIFQLVVHPGFDPSFAMALVLLLDQMFS* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3546 188 Gene3D - 20 188 IPR038595 -
Vra7g3546 188 Pfam LURP-one-related 28 181 IPR007612 -
Vra7g3546 188 PANTHER PROTEIN LURP-ONE-RELATED 17 28 187 - -
Vra7g3546 188 SUPERFAMILY Tubby C-terminal domain-like 28 187 IPR025659 -
Vra7g3546 188 PANTHER - 28 187 IPR007612 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3546 Vra-Chr7 54797045 54798864 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3546 - - gmx:100782098 304.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0254 11 1755629 1756839 Vra7g3546 7 54797045 54798864 PCT