Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0254 ATGAGGGTGTTTCCTAGACTCAGATCCCTGTCGAGAGCAGTTCATCAGGAACAAGAACAAGAGCATGACGAGGAGGAGAAAAACAACGTAGAACAGTTGAGCACGTCCCTGACAGTTTGGAGAAAATCCTTGGTGATGAGTTGCAAAGGATTCACTGTCATCGATAGTTGTGGGAATTTGGTGTATCGGGTCGACAATTATATTGGTCGACCCAACGAAGTCACTCTCATGGATGCCTCGGGAAAATCTATTCTGACCATGTTCCGCCGCAGGAGGCTTGGATTGTTGGAAGAATGGTTTGTGTATGAAGGGGAAGTGGGGAACATTAGAAGGAGAAGTAAATTGTCTAAGCCATCAAAGAGTCCAATTTGTTGTGTAAGGAGGCATGTCAATATTTTACATGGAAACTCCAATGTTCTGGCCTACGTCTTCCGTGGAGTCTCACATTCAGATAAACGGTGTGTGGCGTTCACTGTAGAGGGTTCCTACGCAAATCGTACGTGTAAGGTGTTGGATGAGTGTAGAAGGGTGGTGGCTGAAATCAAGAGGAAGGAAGCTAACACCAAAAACGTCTCTTTTGGGATAGAGATTTTTCAGTTGGTTGTGCATTCTGGCATTGATCCAGCCTTTGCCATGGCACTCGTCTTACTCCTCGATCAAATGTTTTCGTGA 672 0.4539 MRVFPRLRSLSRAVHQEQEQEHDEEEKNNVEQLSTSLTVWRKSLVMSCKGFTVIDSCGNLVYRVDNYIGRPNEVTLMDASGKSILTMFRRRRLGLLEEWFVYEGEVGNIRRRSKLSKPSKSPICCVRRHVNILHGNSNVLAYVFRGVSHSDKRCVAFTVEGSYANRTCKVLDECRRVVAEIKRKEANTKNVSFGIEIFQLVVHSGIDPAFAMALVLLLDQMFS* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0254 223 Gene3D - 27 223 IPR038595 -
Vra11g0254 223 Coils Coil 7 35 - -
Vra11g0254 223 PANTHER PROTEIN LURP-ONE-RELATED 17 14 222 - -
Vra11g0254 223 SUPERFAMILY Tubby C-terminal domain-like 32 222 IPR025659 -
Vra11g0254 223 PANTHER - 14 222 IPR007612 -
Vra11g0254 223 Pfam LURP-one-related 27 216 IPR007612 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0254 Vra-Chr11 1755629 1756839 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0254 - - gmx:100804978 354.369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0254 11 1755629 1756839 Vra11g0254 11 1755629 1756839 ECH
Vra11g0254 11 1755629 1756839 Vra7g3546 7 54797045 54798864 PCT