Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3538 ATGGCCATGCATCGCGAGTCTTGGGCTTTTGTATTCGGTCTTTTGGGCAACATCATCTCCTTTGGAGTGTTTCTTGCTCCATTGCCAACCTTTTACCAAATCTTCAAGAAGAAATCCACCGAAGGGCATCAGTCACTTCCTTACGTTGTTGCACTGTTCAGTGCAATGCTCTGGATTTACTATGCATTCGTGAAAAGGGAAGCTGTTCTTCTTCTCATTACCATTAACACGTTTGGAATTGTTGTGGAATCAATTTACCTTACAATCTTCCTAATTTACGCTCCAAGGAAGCCTAGGCTTACGGCCATCAAGCTTCTTCTCTTGGTGAACGTGTTTGGCTTCGGAGCCATGCTTCTGGCAACTCTCTACCTGTCCAAGGGAGCAAAGCGTCTTGCCATCATACGATGGATTCGTCTTGTTTTCAACATCAGTGTCTTTGCTGCAGATCTCTTCAAAATTATTAGGCGAGTGATTAAGACAAGGAGCGTGGAATACATGCCATTTACCTTGTCCATGTTTTTGACCATCAATGCTGTTATGCGGTTCTTCTACAGCCTTCTTCTCAGGGATTATTATGCTGCTCTCCCAAACACACTTGGTTTTCTGTTCGGCATAATTCAGATGGTGATTTATTTGATGTACGGAAACGCCACTCCAGTGGCACTAGATGAGCCGGTGAAGGCTAAAGAAGCGAATGGCCACATTGTTGGAGCTGTGAAGATGGGAACAATAGAGCCAAACCATGGAGGTGCTGGTCTTGGTGGTGTTGGCAAAGTCTGA 780 0.4487 MAMHRESWAFVFGLLGNIISFGVFLAPLPTFYQIFKKKSTEGHQSLPYVVALFSAMLWIYYAFVKREAVLLLITINTFGIVVESIYLTIFLIYAPRKPRLTAIKLLLLVNVFGFGAMLLATLYLSKGAKRLAIIRWIRLVFNISVFAADLFKIIRRVIKTRSVEYMPFTLSMFLTINAVMRFFYSLLLRDYYAALPNTLGFLFGIIQMVIYLMYGNATPVALDEPVKAKEANGHIVGAVKMGTIEPNHGGAGLGGVGKV* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3538 259 Pfam Sugar efflux transporter for intercellular exchange 11 97 IPR004316 GO:0016021
Vra7g3538 259 Pfam Sugar efflux transporter for intercellular exchange 135 216 IPR004316 GO:0016021
Vra7g3538 259 Gene3D - 11 97 - -
Vra7g3538 259 PANTHER RAG1-ACTIVATING PROTEIN 1 4 247 - -
Vra7g3538 259 Gene3D - 129 221 - -
Vra7g3538 259 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 4 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3538 Vra-Chr7 54715149 54717044 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g3538 1 246 Miscellaneous Gene Families AT5G50800 53.036 4.17e-84 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3538 K15382 - gmx:100805676 431.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g3538 7 54715149 54717044 Vra7g3538 7 54715149 54717044 ECH
Vra7g3538 7 54715149 54717044 Vra5g0638 5 9840232 9842393 PCT