Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3504 ATGGCAGTCCTTTCGCGAACTACCCCCACCTACTCCTACACCCACTTATCCCGACGACACTTCGATAGGGAAACCAAAGCTTCTGCTGCCGACACTTTCTCATGCTCTACCTGGGTTTCTGCTAAGAAGCCTTCTCCTACGCAGAGGATTGTCACACGTGGGGGAAGAGTGATTGTTGCTGCTAGCCCTCCCACTGAAGATGCCGTGGTTGTCACGGACCCACTCACCAAGCAGGATCTTGTGGACTATCTTGCCTCGGGTTGCAAGCCCAGGGAAAAATGGAGAATAGGTACTGAACACGAGAAGTTTGGTTTTGAGTTTGGAAGTTTGCGTCCTATGAAGTATGAGCAAATAGCAGAATTATTGAATGGAATTGCTGAGAGATTTGACTGGGATAAAATAATGGAAGGTGATAAAATTATTGGACTCAAACAGGGGAAGCAGAGCATATCGTTGGAGCCCGGTGGTCAGTTTGAACTTAGTGGAGCTCCTCTTGAAACCTTGCACCAGACTTGTGCTGAAGTCAATTCACACCTTTATCAGGTTAAAGCTGTAGCTGAGGAAATGGGAATTGGATTTTTGGGAATTGGTTTCCAGCCAAAGTGGGGAATCAAAGACATACCTGTAATGCCAAAGGGAAGGTATGATATTATGAGGAATTACATGCCTAAAGTTGGTTCTCTGGGGCTTGACATGATGTTCAGGACATGCACTGTACAGGTCAATCTGGACTTTAGTTCAGAAGCAGACATGATCAGGAAATTTCGTGCTGGCCTTGCTCTACAGCCTATAGCAACGGCTCTTTTTGCGAATTCACCTTTTAAAGAGGGAAAGCCAAATGGTTTTGTCAGCATGAGAAGCCATATTTGGACCGATACTGACAAGGACCGCACAGGCATGCTGCCTTTTGTCTTTGATGATTCTTTTGGGTTTGAGCAGTATGTTGATTATGCTCTTGATGTTCCTATGTATTTTGTCTACCGGAAACATAGATATATTGATTGTACTGGAAAGACCTTCAGGGACTTCTTGGATGGAAGACTTCCTTGTATTCCTGGGGAATTACCAACTCTCAATGATTGGGAAAATCACTTGACAACTATATTTCCTGAGGTCAGGCTGAAGAGGTATTTGGAGATGAGAGGTGCTGATGGAGGCCCTTGGAGAAGGTTATGTGCATTACCAGCACTCTGGGTAGGGTTATTGTACGATGATGCTTCTCTACAAAGTGTTTTGGATTTGACAGCTGATTGGACCCCAGAAGAAAGACTGATGTTAAGGAATAAGGTTCCCGTAACTGGTCTAAAAACACCATTCCGAGATGGTTTGCTGAAGCATGTTGCTGAAGATGTTCTACAGTTGGCAAAGGATGGCTTGGAGAGAAGAGGCTTCAAGGAATCGGGATTTTTGAATGAGGTCGCCGAGGTGGTTAGAACAGGCGTCACTCCAGCTGAGAAGCTTTTGGAATTGTATCATGGAAAGTGGGAGCAATCCGTAGATCATGTGTTTGAGGAATTGCTTTATTAA 1527 0.4479 MAVLSRTTPTYSYTHLSRRHFDRETKASAADTFSCSTWVSAKKPSPTQRIVTRGGRVIVAASPPTEDAVVVTDPLTKQDLVDYLASGCKPREKWRIGTEHEKFGFEFGSLRPMKYEQIAELLNGIAERFDWDKIMEGDKIIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGIKDIPVMPKGRYDIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSSEADMIRKFRAGLALQPIATALFANSPFKEGKPNGFVSMRSHIWTDTDKDRTGMLPFVFDDSFGFEQYVDYALDVPMYFVYRKHRYIDCTGKTFRDFLDGRLPCIPGELPTLNDWENHLTTIFPEVRLKRYLEMRGADGGPWRRLCALPALWVGLLYDDASLQSVLDLTADWTPEERLMLRNKVPVTGLKTPFRDGLLKHVAEDVLQLAKDGLERRGFKESGFLNEVAEVVRTGVTPAEKLLELYHGKWEQSVDHVFEELLY* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3504 508 SUPERFAMILY Glutamine synthetase/guanido kinase 86 506 IPR014746 GO:0003824
Vra7g3504 508 Pfam Glutamate-cysteine ligase family 2(GCS2) 126 414 IPR006336 GO:0004357|GO:0042398
Vra7g3504 508 PANTHER GLUTAMATE--CYSTEINE LIGASE, CHLOROPLASTIC 35 508 IPR035434 GO:0004357|GO:0006750
Vra7g3504 508 PANTHER GLUTAMATE--CYSTEINE LIGASE 35 508 - -
Vra7g3504 508 TIGRFAM glu_cys_lig_pln: glutamate--cysteine ligase 74 508 IPR011556 GO:0004357|GO:0006750
Vra7g3504 508 PIRSF GCL 59 508 IPR035434 GO:0004357|GO:0006750
Vra7g3504 508 Gene3D - 60 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3504 Vra-Chr7 54325431 54333060 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3504 K01919 - gmx:547545 941.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0279 11 1970455 1973945 Vra7g3504 7 54325431 54333060 PCT