Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3500 ATGGCCACTCAACCCACCAACCATCCAAACTCAGTATACGATTTTACTGTCAAGGATACTAAAGGTGATGATGTTGATCTTGTCACTTACAAAGGAAAGGTATTGGTCATTGTTAATGTTGCTTCCAAATGTGGCATGACCAACTCAAATTATGTGGAGTTGAATCAACTATATGAGAAGTACAAAGACAAAGGGTTGGAGATTCTGGCATTTCCATGTAATCAATTTGGGGAGGAAGAACCTGGAAGCAATGATCAAATTAAGGAGTTTGTCTGCACTCGCTTTAAATCTGAATTTCCCATCTTTGATAAGATTGAAGTGAATGGGGACAATTCTGCTCCTTTATATAAATTCTTGAAGTCTGGTAAGTGGGGAATATTTGGGGATGACATTCAGTGGAACTTTGCCAAGTTTCTAGTTGACAAGGATGGGCAAGTGGTAGATCGCTATTATCCCACCACATCTCCTCTTAGCCTTGAGCGAGACATCCGTAAGCTACTTGGTTTGTCTGAATGA 516 0.4012 MATQPTNHPNSVYDFTVKDTKGDDVDLVTYKGKVLVIVNVASKCGMTNSNYVELNQLYEKYKDKGLEILAFPCNQFGEEEPGSNDQIKEFVCTRFKSEFPIFDKIEVNGDNSAPLYKFLKSGKWGIFGDDIQWNFAKFLVDKDGQVVDRYYPTTSPLSLERDIRKLLGLSE* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3500 171 PRINTS Glutathione peroxidase family signature 30 47 IPR000889 GO:0004602|GO:0006979
Vra7g3500 171 PRINTS Glutathione peroxidase family signature 66 82 IPR000889 GO:0004602|GO:0006979
Vra7g3500 171 PRINTS Glutathione peroxidase family signature 131 140 IPR000889 GO:0004602|GO:0006979
Vra7g3500 171 Pfam Glutathione peroxidase 12 120 IPR000889 GO:0004602|GO:0006979
Vra7g3500 171 ProSiteProfiles Thioredoxin domain profile. 6 168 IPR013766 -
Vra7g3500 171 SUPERFAMILY Thioredoxin-like 11 167 IPR036249 -
Vra7g3500 171 ProSiteProfiles Glutathione peroxidase profile. 2 171 IPR000889 GO:0004602|GO:0006979
Vra7g3500 171 ProSitePatterns Glutathione peroxidases active site. 32 47 IPR029759 -
Vra7g3500 171 Gene3D Glutaredoxin 1 169 - -
Vra7g3500 171 PANTHER GLUTATHIONE PEROXIDASE 1 169 IPR000889 GO:0004602|GO:0006979
Vra7g3500 171 ProSitePatterns Glutathione peroxidases signature 2. 69 76 IPR029760 -
Vra7g3500 171 CDD GSH_Peroxidase 11 163 IPR000889 GO:0004602|GO:0006979
Vra7g3500 171 PANTHER GLUTATHIONE PEROXIDASE 8-RELATED 1 169 - -
Vra7g3500 171 PIRSF Glutathion_perox 1 170 IPR000889 GO:0004602|GO:0006979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3500 Vra-Chr7 54298723 54301367 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3500 K00432 - gmx:100808523 321.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0284 11 2017866 2019431 Vra7g3500 7 54298723 54301367 PCT