Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0284 ATGGCTAGCCAATCAAACACTAAATCATCAGTTCATGATTTCACAGTTAAAGATGCCAGGGGAAATGATGTTAATCTGGGAGATTACAAAGGAAAAGTTCTTCTCATTGTCAATGTTGCCTCACAATGTGGCTTGACTAATTCAAACTACACAGAGCTGAATCAAGTGTATGATAAATACAAAGGGAAAGGACTTGAAATTCTGGCATTCCCTTGCAATCAGTTTGGGGCTCAGGAACCAGGAACTAATGAAGAGATAGTGGAATTTGCTTGTACTCGCTTCAAAGCTGAGTTTTCCATTTTTGACAAGGTGGATGTGAATGGTGACAATGCTGCTCCACTGTACAAATTTCTGAAATCAAGCAAAGGTGAAGTCTTAGGAGATAGTATCAAATGGAACTTCTCTAAATTTCTTGTTGACAAGGATGGGAATGTGGTTGACCGTTATGCACCAACAACTTCTCCTCTAAGCATTGAGAAAGACATCAAGAAGCTGTTCATCATGAATGTGGAGTGGTCACTGAATGAATATCATCATGAATAA 543 0.3886 MASQSNTKSSVHDFTVKDARGNDVNLGDYKGKVLLIVNVASQCGLTNSNYTELNQVYDKYKGKGLEILAFPCNQFGAQEPGTNEEIVEFACTRFKAEFSIFDKVDVNGDNAAPLYKFLKSSKGEVLGDSIKWNFSKFLVDKDGNVVDRYAPTTSPLSIEKDIKKLFIMNVEWSLNEYHHE* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0284 180 ProSiteProfiles Thioredoxin domain profile. 5 167 IPR013766 -
Vra11g0284 180 SUPERFAMILY Thioredoxin-like 10 165 IPR036249 -
Vra11g0284 180 Gene3D Glutaredoxin 1 167 - -
Vra11g0284 180 ProSitePatterns Glutathione peroxidases signature 2. 68 75 IPR029760 -
Vra11g0284 180 ProSitePatterns Glutathione peroxidases active site. 31 46 IPR029759 -
Vra11g0284 180 Pfam Glutathione peroxidase 11 119 IPR000889 GO:0004602|GO:0006979
Vra11g0284 180 CDD GSH_Peroxidase 10 162 IPR000889 GO:0004602|GO:0006979
Vra11g0284 180 ProSiteProfiles Glutathione peroxidase profile. 1 172 IPR000889 GO:0004602|GO:0006979
Vra11g0284 180 PANTHER GLUTATHIONE PEROXIDASE 1 166 - -
Vra11g0284 180 PIRSF Glutathion_perox 1 169 IPR000889 GO:0004602|GO:0006979
Vra11g0284 180 PANTHER GLUTATHIONE PEROXIDASE 1 166 IPR000889 GO:0004602|GO:0006979
Vra11g0284 180 PRINTS Glutathione peroxidase family signature 29 46 IPR000889 GO:0004602|GO:0006979
Vra11g0284 180 PRINTS Glutathione peroxidase family signature 65 81 IPR000889 GO:0004602|GO:0006979
Vra11g0284 180 PRINTS Glutathione peroxidase family signature 130 139 IPR000889 GO:0004602|GO:0006979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0284 Vra-Chr11 2017866 2019431 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0284 K00432 - gmx:100500036 316.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0284 11 2017866 2019431 Vra11g0284 11 2017866 2019431 ECH
Vra11g0284 11 2017866 2019431 Vra7g3500 7 54298723 54301367 PCT