Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3489 ATGGCTAAGGTTTACCCTCAGTTACCAACATCTCCTCAGACTCAGTGTCTCACATCCAAAAGAGAAACATACACTCTATGGTTGAAATCACTCGTCTTCCACTCCAATGGATGCACTGTCTATGACTCAAATGGTGACATCGTTTACAGAGTTGACAACTATGACAGAAAGGGTAGAAGAGAGGTTAATCTCATGGATCTACGAGGCAAAGTTCTCTGCACCATAAAGAAGAGATTACTAGCTCTTGGATGTTGGGAAGGACACAGATGCATCAGTTCAGATTTTGGCAACCAGGAACAACCCTGGTTCCAAGTAAAAAGATGTAACCAAATGATCAAAGGGAAAGTAGCTTGCCAAATTTCTGTGGGGTGCCAAAAGTACAGCATAGTAAGAATCGGTGGCAAAGCAGAAGAATTTAGGATCGTGAACACCGATGGAGAAATAGTTGCCGAGGCAAAGCAAAAACACTCACCCTCAGGTGTTGTACTGAGCAACGATGTTCTAACGTTGGATTTGGCTGCTGGCACGGATCATTCTCTCATAATGGCTTTAATCACAGTATATGGATTGATATGTGGTATAATGTAA 588 0.4235 MAKVYPQLPTSPQTQCLTSKRETYTLWLKSLVFHSNGCTVYDSNGDIVYRVDNYDRKGRREVNLMDLRGKVLCTIKKRLLALGCWEGHRCISSDFGNQEQPWFQVKRCNQMIKGKVACQISVGCQKYSIVRIGGKAEEFRIVNTDGEIVAEAKQKHSPSGVVLSNDVLTLDLAAGTDHSLIMALITVYGLICGIM* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3489 195 Gene3D - 13 193 IPR038595 -
Vra7g3489 195 Pfam LURP-one-related 12 187 IPR007612 -
Vra7g3489 195 PANTHER - 2 192 IPR007612 -
Vra7g3489 195 SUPERFAMILY Tubby C-terminal domain-like 13 192 IPR025659 -
Vra7g3489 195 PANTHER PROTEIN LURP-ONE-RELATED 4 2 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3489 Vra-Chr7 54233915 54237714 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3489 - - pvu:PHAVU_002G287800g 384.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0292 11 2072680 2073570 Vra7g3489 7 54233915 54237714 PCT