Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0292 ATGAATTGGAATATAATAGTGGTTGAAGCCTTCAACTTGAAATCAACCACTCCTTCTTCTTGCATTCTCTTTCCTTCTGATTCGGCTCAAATGGCGAAGGTTTACCCTGAACAGGAGGAACCCACTTTCTCTGGCTGCCCCTCCTATGGACCACACACATACACCCTCTGGATGAAATCACTCGTTTTCAACTCTAACGGTTGCACCGTCTACGATTCTAACGGTCTCATCGTTTATCGCGTTGATAACTACGACACAAAGGGTAGAAGAGACGTTAACCTTTTGGATCTTCGAGGAAGAGTTCTCTGCACCATACACAAGAGAGTACTTGGTTTTGGACGTTGGGATGTGTACAGAAGTAGCTATGACAGTAGTAACAGTGTAAACCAGGAAAAGCCTTGGTTTCAAGTTAAAAGATGCCATGAGATGATGACCGGAAAAGTGACGTGCCAGATTAGTACGGTGGAGTGTCAGAAGTACTGCATAGAGAAAATCGGTGCCAAAACAGCGTTTCGGATTGTCAACACGGATGATGGAGACATAGTTGCCCATGCGAAGCAAAAGCACTCGACCTCCGGAGTTATACTGGGCAGTGATGTTCTAACGTTGGATGTTGAAGGTGGAATTGATCATTCTCTAGTAATGGCTTTTGTCACTGTGTTTGGATTAATCTGCGGCAGAATGTAA 687 0.444 MNWNIIVVEAFNLKSTTPSSCILFPSDSAQMAKVYPEQEEPTFSGCPSYGPHTYTLWMKSLVFNSNGCTVYDSNGLIVYRVDNYDTKGRRDVNLLDLRGRVLCTIHKRVLGFGRWDVYRSSYDSSNSVNQEKPWFQVKRCHEMMTGKVTCQISTVECQKYCIEKIGAKTAFRIVNTDDGDIVAHAKQKHSTSGVILGSDVLTLDVEGGIDHSLVMAFVTVFGLICGRM* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0292 228 Gene3D - 47 227 IPR038595 -
Vra11g0292 228 PANTHER - 32 227 IPR007612 -
Vra11g0292 228 SUPERFAMILY Tubby C-terminal domain-like 50 225 IPR025659 -
Vra11g0292 228 PANTHER PROTEIN LURP-ONE-RELATED 4 32 227 - -
Vra11g0292 228 Pfam LURP-one-related 52 220 IPR007612 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0292 Vra-Chr11 2072680 2073570 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0292 - - gmx:100815833 311.997
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0292 11 2072680 2073570 Vra11g0292 11 2072680 2073570 ECH
Vra11g0292 11 2072680 2073570 Vra7g3489 7 54233915 54237714 PCT