Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3413 ATGAATCACTCTGGGGCTGGAAGTGATGATATAAGAGCGGTTGAAATTACCAAGGATAGGAATGGAATAGGCCTAGTGGTTCTGCGGAACCATCGAGGAGCTTCAGCAAGGGTTAGTTTGCACGGAGGGCAGCTTCTTTCATGGAAATGGGAACGTGGGGAGGAGCTTTTGTTCACTAGTAGTAAGGCAATCATAAGTCCTCTCAAACCATTACGAGGAGGAATTGCAATCTGTTTCCCTCAGTTCAGAAACCGTGGATCATTAGAGCATCATGGGTTTGCCCGGAACAAAATGTGGGTAATTGAACAAGATCCTCCACCGTTACCCACTGATTCTGGTGAAAAAGCCCATATTGACTTGCTGCTCAAACCAACCGAAGATGATCTGAAAATATGGCCACATAGCTTCGAACTTCGGTTAAGGGTTTCTTTGGGAGGAAATGGATATTTAACTCTGATTTCTCGAGTCAGGAACGTCAATAGCAAGCCCTTCAGTTTCTCCTTTGCGTACCATACATATTACTCTGTCTCTGATATCAGTGAAGTGAGGGTGGAAGGATTGGAAACTCTTGACTATCTAGACAACTTACACAACCAAGAACGCTTCACGGAACAAGGAGATGCATTGACATTTGAATCAGAGGTGGATCGAGTGTATCTTGATTCGGGTAGCAGTGGGGTGGCTGTTCTAGACCACGAAAAGAAGCAGACAATCGTCATAAGAAAGGAAGGACTCCCAGATGTTGTTGTTTGGAATCCGTGGGAGAAAAAGTCCAAGGCGATAATGGATTTGGGGGATGAAGAGTACAAGCAGATGGTGTGCGTGGATGGTGCAGCGATTGAGAAACCAATCACGTTGAAGCCAGGTGAAGAATGGACTGGCCGCTTGGACCTCTCTGTGGTCCCTTCCACTTGA 915 0.4601 MNHSGAGSDDIRAVEITKDRNGIGLVVLRNHRGASARVSLHGGQLLSWKWERGEELLFTSSKAIISPLKPLRGGIAICFPQFRNRGSLEHHGFARNKMWVIEQDPPPLPTDSGEKAHIDLLLKPTEDDLKIWPHSFELRLRVSLGGNGYLTLISRVRNVNSKPFSFSFAYHTYYSVSDISEVRVEGLETLDYLDNLHNQERFTEQGDALTFESEVDRVYLDSGSSGVAVLDHEKKQTIVIRKEGLPDVVVWNPWEKKSKAIMDLGDEEYKQMVCVDGAAIEKPITLKPGEEWTGRLDLSVVPST* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3413 304 PIRSF PHexose_mutarotase 4 303 IPR025532 -
Vra7g3413 304 Gene3D - 21 301 IPR014718 GO:0030246
Vra7g3413 304 Pfam Aldose 1-epimerase 25 297 IPR008183 GO:0005975|GO:0016853
Vra7g3413 304 CDD D-hex-6-P-epi_like 26 299 IPR025532 -
Vra7g3413 304 PANTHER GLUCOSE-6-PHOSPHATE 1-EPIMERASE 8 304 - -
Vra7g3413 304 SUPERFAMILY Galactose mutarotase-like 19 297 IPR011013 GO:0003824|GO:0005975|GO:0030246
Vra7g3413 304 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 8 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3413 Vra-Chr7 53433410 53440198 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3413 K01792 - zju:107430124 479.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0704 11 5684358 5687805 Vra7g3413 7 53433410 53440198 PCT