Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0704 ATGGCGATGGTTTCCATGGCATTGAGCGTCAACAATCTCACCTTCCCCAACCGTTGCCAAATTAACAGGCGTGGTGGAATGGCGTTTGCAAGCTTGAGCAATCAAAAAAGTGCATCTTTGGGAGTTCGACTGACAGAGGGAGAGGGGAATTTGCCCAAGCTTGTGCTCTCTTCTCCGGCTGGTAGTGAGGCTGAGATATATCTCTACGGAGGGTGCATTACCTCTTGGAAAGTGCCCAGTGGCAAGGACCTCCTCTTTGTTCGGCCTGACGCTGTTTTCAACGGGAAGAAACCAATAAGTGGAGGCGTTCCGCATTGTTTTCCACAGTTTGGTCCTGGTCCAATTCAGCAGCATGGGTTTGCACGGAATATGGATTGGACTCTTGTTGATTCTGAGAACGCAGAAGGAAGTCCTGTTGTAACTCTGGAACTGAAGGACGCTCCTTATAGTCGTGCTATGTGGGATTTCAGCTTCCATGCTTTATTCAAGGTCACACTAAATGCTAAAAGTCTTTCAACCGAACTAACAGTTAAAAATACAGACAGTAAAGCATTCTCATTTAGTACCGCCTTGCATACATATTTTCGAGCTTCTGCTAGTGATGCATCAGTAAAGGGGTTGAAAGGTCTCAAAACTTTGAACAAAGATCCAGATCCTAAAAATCCGGTGGAGGGTAGGGAAGAGAGGGATGTGGTTACTTTCCCTGGATTTGTAGATTGTGTTTACCTTGATGCTTCCAGTGAGTTGCAACTTGACAATGGTTTGGGTGATCTAATATCTATCAAGAACACAAATTGGTCAGATGCTGTGCTGTGGAATCCTTATCTTCAAATGGAAGCATGTTATAAAGATTTTGTTTGTGTCGAAAATGCTAAGATTGGAAGTGTCCAGCTAGAGCCAGAACAGACTTGGACAGCTGTGCAGCACCTTAGCACAGCTTGA 942 0.4501 MAMVSMALSVNNLTFPNRCQINRRGGMAFASLSNQKSASLGVRLTEGEGNLPKLVLSSPAGSEAEIYLYGGCITSWKVPSGKDLLFVRPDAVFNGKKPISGGVPHCFPQFGPGPIQQHGFARNMDWTLVDSENAEGSPVVTLELKDAPYSRAMWDFSFHALFKVTLNAKSLSTELTVKNTDSKAFSFSTALHTYFRASASDASVKGLKGLKTLNKDPDPKNPVEGREERDVVTFPGFVDCVYLDASSELQLDNGLGDLISIKNTNWSDAVLWNPYLQMEACYKDFVCVENAKIGSVQLEPEQTWTAVQHLSTA* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0704 313 PIRSF PHexose_mutarotase 31 313 IPR025532 -
Vra11g0704 313 Gene3D - 50 312 IPR014718 GO:0030246
Vra11g0704 313 CDD D-hex-6-P-epi_like 53 311 IPR025532 -
Vra11g0704 313 SUPERFAMILY Galactose mutarotase-like 53 310 IPR011013 GO:0003824|GO:0005975|GO:0030246
Vra11g0704 313 Pfam Aldose 1-epimerase 53 310 IPR008183 GO:0005975|GO:0016853
Vra11g0704 313 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 19 312 - -
Vra11g0704 313 PANTHER GLUCOSE-6-PHOSPHATE 1-EPIMERASE 19 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0704 Vra-Chr11 5684358 5687805 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0704 K01792 - gmx:100797902 577.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0704 11 5684358 5687805 Vra11g0704 11 5684358 5687805 ECH
Vra11g0704 11 5684358 5687805 Vra7g3413 7 53433410 53440198 PCT