Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3393 ATGGCAGAAAAAACGTTAATCGTAGAAGTGGAGAAAGCCAAAGAGGGCACAGAAGAAAGGCCATCAATGGGTCCTGTATACCGTAGCGTTTTCTGCAATGATCCAACTCCTCCTCCCATACAAGGTCTCGATACATGCTGGGATATTTTTAGGATGTCGGTGGAGAAATATCCTACAAAGTCAATGCTCGGTGTTCGTGAAATTGTGGATGGGAAGCCTGGCAAGTACAAGTGGCAAACTTACCAAGAGGTGTACGACATGGTGGTCAAGGTTGGAAAGTCCATTCGTGCTTGTGGTTATGGGGAGGGAGTAAAATGTGGTATATATGGTGCCAATAGCCCAAAATGGATTATGAGCATGCAGGCCTGTAATGCTCATGGACTTTTCTGTGTTCCTTTATATGATACCTTGGGGTCTGGGGCTGTTGAATTTATTATAAGCCATGCAGAGGTCTCAATTGCTTTTGTTGAAGAAAAGAAGATACCTGAGCTGTTGAAGACATTTCCAAACGCAGCAAACTATGTCAAGACACTTGTGAGTTTTGGAGATGTTACTCCTGAACAAAGGCAACAAGTTGAACAGTTTGGATTGACCGTGTATTCATGGGAAGACTTTTTGAAAGTGGGTCATGATCAGACTTTTGATCTTCCTGAGAAAAAGAAAAGTGATGTATGTACAATAATGTATACCAGCGGAACTACTGGTGACCCTAAGGGTGTATTGATAACCAATGAAAGCATTATCACACTTTTAGCTGGGATTGACAAAGTTCTGATGAGCTGCAATGAGAAATTGAGTGACAAAGATGTATACCTATCATACCTTCCTCTTGCACATATCTTTGATAGGGTCATTGAAGAGGCAATGATAATGCATGGTGCCTCAATAGGTTTCTGGCGTGGAGATATCAAATTGTTACTAGAAGACATTGGGGAGCTAAAGCCAACCATTTTCGTTGCAGTTCCCCGTGTACTTGACAGAGTATACAATGGTTTGAATCAGAAGATTTCTACAGGGGGCTTTATGAAACAAACAGTGTTCAATTTCGCCTACTCATACAAGTTGCATAGCTTAGGTAAAGGGCGAAATCATGAGGAAGCATCTCCACTATTTGACAAAATTGTATTTAATAAGGTAAAGCAAGGTTTAGGGGGAAGGGTGCGTATTATTTTGTCTGGAGCAGCACCTCTATCCAAACATGTGGAAGGTTATCTGCGGGTGGTGACTTGTGCTCATATCCTACAAGGATATGGTCTAACTGAAACCTGTGCGGGAACCTTTGTGTCATTACCAAACGAAAAGGACATGCTTGGCACAGTGGGGCCTCCTGTACCATATGTGGATGTGTGCCTAGAATCTATTCCTGAAATGGGATACGATGCACTTGGAGACCCACCAAGAGGAGAAATATGTGTGAGGGGAAGTACAGTGTTCAAAGGGTACTACAAACGTGAAGACCTAACCAAAGAGGTCATGACCAATGGCTGGTTCCACACAGGTGATATTGGGGAGTGGCAACCAAATGGAGCCATGAAAATTATTGATAGGAAAAAAAATATATTCAAGCTTTCACAAGGAGAATATGTTGCTGTTGAACACCTTGAGAACATTTATGTTCAAGCTTCTGTCGTTGATTCTATATGGATTTATGGAAATAGTTTTGAGTCATACTTAGTTGCTATTGTTAACCCCAACAAGCAAGCAATTGAAAAATGGGCAGAAGAAAATCATATAACTGCAGACTTTGATTCTGTCTGTGAAGATTCTAAAACAAAAACTTACGTAATTGGAGAGCTCGTCAAGATTGCAAAGGAAAAGAAGTTAAAAGGTTTTGAGTTTATTAAAGGAGTCCATCTTGACCCAGTTCCATTTGACATGGAACGTGGCCTTATGACTCCGACATTTAAGAAGAAAAGGCCAGAACTGCTTAAATACTACCAGAATACCATTGACGAGATGTATAAAACACTGAACGAAAGCAACAAATCCAATGCCTGA 1998 0.4104 MAEKTLIVEVEKAKEGTEERPSMGPVYRSVFCNDPTPPPIQGLDTCWDIFRMSVEKYPTKSMLGVREIVDGKPGKYKWQTYQEVYDMVVKVGKSIRACGYGEGVKCGIYGANSPKWIMSMQACNAHGLFCVPLYDTLGSGAVEFIISHAEVSIAFVEEKKIPELLKTFPNAANYVKTLVSFGDVTPEQRQQVEQFGLTVYSWEDFLKVGHDQTFDLPEKKKSDVCTIMYTSGTTGDPKGVLITNESIITLLAGIDKVLMSCNEKLSDKDVYLSYLPLAHIFDRVIEEAMIMHGASIGFWRGDIKLLLEDIGELKPTIFVAVPRVLDRVYNGLNQKISTGGFMKQTVFNFAYSYKLHSLGKGRNHEEASPLFDKIVFNKVKQGLGGRVRIILSGAAPLSKHVEGYLRVVTCAHILQGYGLTETCAGTFVSLPNEKDMLGTVGPPVPYVDVCLESIPEMGYDALGDPPRGEICVRGSTVFKGYYKREDLTKEVMTNGWFHTGDIGEWQPNGAMKIIDRKKNIFKLSQGEYVAVEHLENIYVQASVVDSIWIYGNSFESYLVAIVNPNKQAIEKWAEENHITADFDSVCEDSKTKTYVIGELVKIAKEKKLKGFEFIKGVHLDPVPFDMERGLMTPTFKKKRPELLKYYQNTIDEMYKTLNESNKSNA* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3393 665 Gene3D - 42 516 IPR042099 -
Vra7g3393 665 Pfam AMP-binding enzyme 54 524 IPR000873 -
Vra7g3393 665 PANTHER LONG CHAIN ACYL-COA SYNTHETASE 4-LIKE 7 656 - -
Vra7g3393 665 CDD LC-FACS_euk 74 655 IPR045311 GO:0004467|GO:0006631
Vra7g3393 665 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 7 656 - -
Vra7g3393 665 ProSitePatterns Putative AMP-binding domain signature. 227 238 IPR020845 -
Vra7g3393 665 SUPERFAMILY Acetyl-CoA synthetase-like 42 657 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3393 Vra-Chr7 53296726 53303389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g3393 3 658 Acyl Lipid Metabolism Gene Families AT4G23850 70.274 0.0 1017
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3393 K01897 - gmx:100811306 1185.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0227 11 1508395 1517807 Vra7g3393 7 53296726 53303389 PCT