Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0227 ATGGCACAGAAGAGCTTCATCGTTGAGGTCGAGAAAGCGAAGGAGGCGAGCGAAGGAAGGCCATCGAGAGGACCTGTGTACCGTAGCCTCTTCGCCAAGGATGGATTCCCTGCTCCTATCCAAGGTCTCGATTGCTGCTGGGACGTTTTCCGATTGTCCGTTGAGAAATATCCAACTAGTCCAATGCTTGGTCGCAGGGAAATTGTGAATGGGAAGGCAGGCAAGTACAAGTGGTTAACATACAAAGAAGTATATGACCAGGTGATTAAGGTTGGGAATTCCATCCGCTACTGTGGTTATGGAGAAGGTGTAAAATGCGGTATTTATGGTGCCAATTCAGCAGAATGGGTTATGAGCATGGAGGCCTGCAATGCTCATGGACTCTATTGTGTACCTTTATATGATACCTTGGGTGCTGGAGCTATAGAATTTATTATATGCCACGCAGAGGTCTCAATTGCATTTGTGGAAGAAAAGAAGATGCCCGAGCTATTGAAGACATTTCCAAATGCAACAAAGTATCTCAAGACAATTGTAAGCTTCGGAAAGGTTACCCCTGAGCAAAAGCAAGAAGTTGAGAAGTTTGGGTTGGCAATATATTCGTGGGATGAATTTTTGCAAGTGGGTCAAGGTCAGAGTTATGATCTTCCAATTAAGAAAAGGAGTGACATCTGTACAATAATGTATACTAGTGGAACTACGGGTGACCCCAAGGGAGTGTTGATATCAAATGAGAGTATTATCACTCTCTTAGCTGGGGTAAAGCGACTGTTGGAGAGTGTCAATGAACAATTGACTGAGAAGGATGTATACATATCATACCTTCCTCTTGCACATATCTTTGATAGGGTCATTGAGGAAACATTCATATGGCATGGTGCTTCAATAGGTTTCTGGCGGGGGGATGTCAAATTGCTAATTGAAGATATTGGGGAACTAAAACCAACTGTTTTCTGTGCTGTTCCCCGTGTGCTTGATAGAGTGTACTCAGGTTTGACACAGAAGATTGCTTCTGGGGGCTTCTTGAAGAGGACATTATTCAACTGTGCTTATTCATATAAGCTGAATAACATGAAGAAAGGGTTTAGCCATGGAGAGGCATCCCCTATTTGTGATAAAATTGTATTTGATAAGGTAAAGCAGGGTTTAGGAGGTAGAGTTCGTCTTATTTTGTCTGGAGCAGCACCTTTATCTGCACATGTGGAAGGTTACTTACGGGTGGTGACTTGTTGTCATGTCCTACAAGGATATGGCCTGACTGAAACCTGTGCGGGAACCTTTGTCTCATTACCAAATGAAATGGAAATGCTTGGAACGGTGGGCCCTCCAGTACCAAATGTTGATGTGTGCCTGGAATCTGTTCCTGAAATGGGATATGATGCCCTAGCAAGCACACCAAGGGGAGAAATTTGTGTAAAGGGTAAAACCTTGTTTTCAGGGTACTACAAACGTGAAGATCTCACCAAAGAGGTTCTGATCGATGAATGGTTCCATACAGGGGATATTGGAGAGTGGCAACCTAATGGAAGCATGAAAATTATTGATAGGAAAAAGAATATATTTAAGCTTTCACAGGGAGAATATGTTGCTGTCGAAAACCTGGAGAACATTTATGGTCAAGTTTCATCTATTGAATCTATATGGGTTTACGGAAACAGTTTTGAGGCCTTCCTTGTTGCTGTTGTTAATCCCAGAAAGGAATCACTTGAACAATGGGCACAAGAAAATGCTATATCCAAGGACTTCAATTCTCTTTGTGAAGATGCTAGAGCAAAAAGTTACATACTTGAAGAGCTCTCAAAGATTGCAAAGGAAAAGAAGCTGAAAGGTTTCGAGGTTATAAAAGGAGTTCATCTTGACCCGATTCCATTTGACATGGAACGTGACCTTATCACTCCAACATATAAGAAGAAGAGGCCACAGTTGCTTAAATTTTATCAGAATGCTATTGACAACTTGTACAAGAGTGCAAAGTAA 1977 0.4203 MAQKSFIVEVEKAKEASEGRPSRGPVYRSLFAKDGFPAPIQGLDCCWDVFRLSVEKYPTSPMLGRREIVNGKAGKYKWLTYKEVYDQVIKVGNSIRYCGYGEGVKCGIYGANSAEWVMSMEACNAHGLYCVPLYDTLGAGAIEFIICHAEVSIAFVEEKKMPELLKTFPNATKYLKTIVSFGKVTPEQKQEVEKFGLAIYSWDEFLQVGQGQSYDLPIKKRSDICTIMYTSGTTGDPKGVLISNESIITLLAGVKRLLESVNEQLTEKDVYISYLPLAHIFDRVIEETFIWHGASIGFWRGDVKLLIEDIGELKPTVFCAVPRVLDRVYSGLTQKIASGGFLKRTLFNCAYSYKLNNMKKGFSHGEASPICDKIVFDKVKQGLGGRVRLILSGAAPLSAHVEGYLRVVTCCHVLQGYGLTETCAGTFVSLPNEMEMLGTVGPPVPNVDVCLESVPEMGYDALASTPRGEICVKGKTLFSGYYKREDLTKEVLIDEWFHTGDIGEWQPNGSMKIIDRKKNIFKLSQGEYVAVENLENIYGQVSSIESIWVYGNSFEAFLVAVVNPRKESLEQWAQENAISKDFNSLCEDARAKSYILEELSKIAKEKKLKGFEVIKGVHLDPIPFDMERDLITPTYKKKRPQLLKFYQNAIDNLYKSAK* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0227 658 Pfam AMP-binding enzyme 65 524 IPR000873 -
Vra11g0227 658 SUPERFAMILY Acetyl-CoA synthetase-like 43 655 - -
Vra11g0227 658 CDD LC-FACS_euk 74 655 IPR045311 GO:0004467|GO:0006631
Vra11g0227 658 PANTHER LONG CHAIN ACYL-COA SYNTHETASE 4-LIKE 6 657 - -
Vra11g0227 658 ProSitePatterns Putative AMP-binding domain signature. 227 238 IPR020845 -
Vra11g0227 658 Gene3D - 42 516 IPR042099 -
Vra11g0227 658 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 6 657 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0227 Vra-Chr11 1508395 1517807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0227 3 656 Acyl Lipid Metabolism Gene Families AT4G23850 74.924 0.0 1065
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0227 K01897 - gmx:100814965 1257.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0227 11 1508395 1517807 Vra11g0227 11 1508395 1517807 ECH
Vra11g0227 11 1508395 1517807 Vra7g3393 7 53296726 53303389 PCT