Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3142 ATGCTGCTATGTCCCAAAGAAGATGCACTTCTTAAACTATTCTACAATGTCTCAAACCCTCTTCACCTTCTCTTTCTCCTTCTCTTCTCCTCCGCCGTTTTCCTTCTCACCTTCTTCACCTTCTCAGGCAGATACCCCTTCATCCAAAGGGATCAAGAATATGAATATGTGTACACCGATGAAGAAGAAGAAGAAGAAGATACTCAAGAAGGGTATTCTTGTGTTGATTCTACCGAGGGAGAAAACATCACTTGTGGGAAAGAAGTTCCTGTGTTTGTGCACAATGAGAGGCATCAAAGGACTCATTCTTATTCGGAAGAATTCGTAAGCCCCAGAGAGAGCTTGAATGAAGAGTCAGAAGAAAAACATTATTATGAAACGTTGTCTCTCCATAAGTCTCCGCAAGTTTCTGACTTCGACAATGAAGAGGCAGAAACGGTCGAAGAAGACTTTACAGAAAGAGATTCTGATTATGTTCCAAATTCTACAAAAGTTGAAAGCAGGAACACCTCCCCCCTCAACCTCAACGCGTACAAAGGAAAAAAAAACCATGACGACGATCACGTTAGCGTTGAAATTATCAGAAACAAGAAGGTGCAAGAGCCAAACCCTGCAAGGGATGAGAGATTCTTTGTTTTTGCTTCTACCCAGTTGCAGAGTAAGAAGTTGATGGTTGAAGAGAAGGATGATGAGTCCTCTAAATGGAAGAGCTCCATCAATTGCAGGGATTCCGAGACTGAGGAGGATGCATTTTCTTCTTCATCCAGAAGAAGTTGTCCCAAGTGGGAATCATACACATTGTTCCAAAAATATGATGAAGAAATGGCAATCCTAGACAGAATTAGTGCACAGAAACTTCATGAAACAGAGTCATTAAGGTCCATCCAAGTGTCTCCAAGATCAATGTCAGAGCGTATTGTGTACAAGTTTCAGACTATAAATAAAAAATCTGTTGATGTTGGTCACAACCCATATCGTGAACTAGAGGCTGCATACGTAGCACAAATTTGCTTGACATGGGAAGCCCTTAGTTGGAACTACAAAAATTTTCGTTCCAAACATGCCTCACGCCAGGACAATGACACAGGTTGCTCTGCCACAGTTGCTCAACAATTCCAGCAGTTTCAGGTTTTGTTACAGAGATACATTGAGAATGAGCCTTATGAGCACGGTAGGAGACCTGAAATATATGCTAGAATGAGACTTTTGGCACCCAAATTACTCCTAGTGCCAGAATATCAAGAGGAGGATCAGAAGGATGGTGGTTTTCAATGCAAAATATCATCAGCTTCATTTCTGAAGATAATGGAGGATGGGATCAAAACATTCATGAATTTTCTAAAGAATGATAAAGAGAAACCCTGTCAGATCCTTGCAGCCTACTTCAGGAGAAACCAAAGAGGCACAGTTGATCCAACATTACTGGGACTAATGAAGAAGGTTAACCAAAAGAAGAGGGTGAAGGTTAAGGATCTTAACCATGCAGGGAAATGCTTGAGGAAGAGAAAGTTAAAGGTGGAAAAGGATATGGATATTTTGATGGCTCTGACAGACCTAAAAGTGGTGTCAAGGGTTTTAAGGATGAGTGAATTGAGTGAAGAACAGTTGCACTGGTGTGAGGAGAAGATGAGCAAAGTGAGAATCATGGAAGGAAAACTTCAGAGAGATTATTCCACACCACTTTTCTTCCCCTCACATTGA 1701 0.4121 MLLCPKEDALLKLFYNVSNPLHLLFLLLFSSAVFLLTFFTFSGRYPFIQRDQEYEYVYTDEEEEEEDTQEGYSCVDSTEGENITCGKEVPVFVHNERHQRTHSYSEEFVSPRESLNEESEEKHYYETLSLHKSPQVSDFDNEEAETVEEDFTERDSDYVPNSTKVESRNTSPLNLNAYKGKKNHDDDHVSVEIIRNKKVQEPNPARDERFFVFASTQLQSKKLMVEEKDDESSKWKSSINCRDSETEEDAFSSSSRRSCPKWESYTLFQKYDEEMAILDRISAQKLHETESLRSIQVSPRSMSERIVYKFQTINKKSVDVGHNPYRELEAAYVAQICLTWEALSWNYKNFRSKHASRQDNDTGCSATVAQQFQQFQVLLQRYIENEPYEHGRRPEIYARMRLLAPKLLLVPEYQEEDQKDGGFQCKISSASFLKIMEDGIKTFMNFLKNDKEKPCQILAAYFRRNQRGTVDPTLLGLMKKVNQKKRVKVKDLNHAGKCLRKRKLKVEKDMDILMALTDLKVVSRVLRMSELSEEQLHWCEEKMSKVRIMEGKLQRDYSTPLFFPSH* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3142 566 PANTHER DUF1666 FAMILY PROTEIN 4 566 - -
Vra7g3142 566 Pfam Protein of unknown function (DUF1666) 327 564 IPR012870 -
Vra7g3142 566 MobiDBLite consensus disorder prediction 136 184 - -
Vra7g3142 566 PANTHER DNA LIGASE (DUF1666)-RELATED 4 566 - -
Vra7g3142 566 MobiDBLite consensus disorder prediction 162 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3142 Vra-Chr7 51207262 51210373 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3142 - - gmx:100776190 923.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g3142 7 51207262 51210373 Vra7g3142 7 51207262 51210373 ECH
Vra7g3142 7 51207262 51210373 Vra1g0602 1 7010241 7013653 PCT