Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0602 ATGCCATGTTCCAAAGAAGAAGCTCTTGTTAGACTCTTCTACAATGTCTCTAGCTCCTTCCACCTTCTCTTCCTCCTCCTCTTCTCTTCTTCCCTTTTGCTTATCCACTTCTTGAACTTCATTGCCAGCTTCACCATCTTCCAAAGAGATCACCACTATGAATATGTGTCTTCAGAGTACGATGAAGAAGAAGAAGAAGAAGAAGAAGAAATTCAAGAAAGATACTCTTATGAGCATGATTCTGGTGAGTCAGATCACCTGGTAGCTGACATCATTGCTGGTGGAGAAACCCTTTTGTTTGTGCACAACGACCTGCCTCTGAGGACTCATTCCTCTTCTGATGAATTCACAAGCCCCCGTGATAGCCTTGTTGAAGAAGAGTTAGAAGAAAACTATTCAACAGAAACCTTGTTTTTTCACAAGTCACCTTTGGTCTCAGACATAGAAAATGTACAAGAGGTAGAAGAATTTCCAGCTGAAGATGCTGATTCTGTTCCAAATTCTGTCCCTGATGAAAGCAGGCCCACATCGCCCATCACCCTGAACCTCTACAAAAGTGACTCACCAGACAGTGACAAAAACTGTGACGAAGATCGTGTTGGAATTGGACTTGTTGAAAATAAGAAGCTGCAAGAGGAAAGCCTCGCACGAGATGAGAGATTCTTGGTCTATGATCCTACCCAATTGGAGGCCAAGAAGCTCATTGTTCAGGAAAAAGATGATGAAGAAATATATGGTGACTCATGCACTGTTGGATCCACTTCTAAGAGTTCCTCTGAGTGGAGGAGCTCTATTAACTGCAGAGATTCTGGAACTGATGACCCTTTTTCTTCCTCATCAAGAAGAAGTTGTCCCAAGTGGGAATCATACACAGTTTTCCAAAAGTATGATGAAGAAATGTCATTCCAAGATAGAATTAGTGCACAGAAACTTCAAGAAATTGAATCTTTAAGGTCTATCAAGGTATCTCCCAGGTCAATTTCAGAGCGCATTGTGTTCAAGTTTTCAAGTATGAACAAGAAACCAAATGATACACGTCGCAACCCATATCATGAACTTGAGGCTGCATATGTTGCACAAATTTGCTCAACATGGGAAGCTCTTAATTGGAACTACAAGAATTTTCAATCCAAGCGAGCTTCACGAGGCCATGATGTTGACGTGGGTTGTCCAGCCACCATTGCACAGAGATTACAACAATTTCAAGTGTTGTTGCAGAGATACATAGAAAACGAGCCTTATGAGCATGGTAGAAGACCAGAGATCTATGCTAGAGTGAGGCATTTAGCTCCAAAATTGCTACTAGTACCAGAATATCGAGAATCAGAAGATGATGAGAGAGAAGAAAATGGTGTTCAGTCAAAAATATCATCAGCTTCATTTCTTACGATAATGGAAGATGGGATAAGAACGTTCATGAGTTTTCTGAAGGCTGATAAAGAGAAACCAAGTCAGATATTCGCAGCTTACTTTCGGAGAAACCGAAGACCCTTGGTTGATCCAACACTTCTACGCCTCATCAAGAAAGTTAATCAAAAGAAGAAGATGAAAGTGAAGGACCTTCGACGTTCAAGAAAATGCTTGAGGAAGAGAAAGCTGAAGGGAGAAGAAGAGATGGAGATTTTGATGGCACTGATAGACCTGAAAGTGGTGTCAAGGGTTTTGAGAATGAGTGAGTTAAGTGAGGAACAGTTGCATTGGTGTGAAGAGAAGATGAGGAAAGTAAGAGTGGTGGAAGGAAAACTACAAAGAGATTCCTCTCCACTTTTTTTTCCTGCACATTGA 1785 0.4123 MPCSKEEALVRLFYNVSSSFHLLFLLLFSSSLLLIHFLNFIASFTIFQRDHHYEYVSSEYDEEEEEEEEEIQERYSYEHDSGESDHLVADIIAGGETLLFVHNDLPLRTHSSSDEFTSPRDSLVEEELEENYSTETLFFHKSPLVSDIENVQEVEEFPAEDADSVPNSVPDESRPTSPITLNLYKSDSPDSDKNCDEDRVGIGLVENKKLQEESLARDERFLVYDPTQLEAKKLIVQEKDDEEIYGDSCTVGSTSKSSSEWRSSINCRDSGTDDPFSSSSRRSCPKWESYTVFQKYDEEMSFQDRISAQKLQEIESLRSIKVSPRSISERIVFKFSSMNKKPNDTRRNPYHELEAAYVAQICSTWEALNWNYKNFQSKRASRGHDVDVGCPATIAQRLQQFQVLLQRYIENEPYEHGRRPEIYARVRHLAPKLLLVPEYRESEDDEREENGVQSKISSASFLTIMEDGIRTFMSFLKADKEKPSQIFAAYFRRNRRPLVDPTLLRLIKKVNQKKKMKVKDLRRSRKCLRKRKLKGEEEMEILMALIDLKVVSRVLRMSELSEEQLHWCEEKMRKVRVVEGKLQRDSSPLFFPAH* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0602 594 MobiDBLite consensus disorder prediction 158 196 - -
Vra1g0602 594 MobiDBLite consensus disorder prediction 169 188 - -
Vra1g0602 594 PANTHER DUF1666 FAMILY PROTEIN 1 594 - -
Vra1g0602 594 MobiDBLite consensus disorder prediction 249 283 - -
Vra1g0602 594 Pfam Protein of unknown function (DUF1666) 352 592 IPR012870 -
Vra1g0602 594 Coils Coil 511 531 - -
Vra1g0602 594 PANTHER DNA LIGASE (DUF1666)-RELATED 1 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0602 Vra-Chr1 7010241 7013653 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0602 - - gsj:114425724 912.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g0602 1 7010241 7013653 Vra1g0602 1 7010241 7013653 ECH
Vra7g3142 7 51207262 51210373 Vra1g0602 1 7010241 7013653 PCT