Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3136 ATGGCTCCGAAATTGGTGAAATCGGGGTCGTTCCGTCATGGTTTGGCGGAGAAGAAGGAGAGGCTTCTCTCGGGGAAGAGTAGTATTGATATCTCTGAGATAGGGATTGGCATGGTGATGCAAGAGGAAGAGCAATCGAGGATGTTGAAGTGGTGGAGCACGGTCAAGCGTGTAGCTGGGAAAGCATTGGAAATGGGTCGGTCTGATCCGAGAAAGATAATCTTTTCTGCAAAAACGGGTCTTGCTTTGACCCTTCTTTCACTGTTGATTTTCCTCAAAGAACCCTTCAAGGACATGAGTCTTTACTGTGTCTGGGCCATTCTTACTGTTGTCGTAGTCTTCGAATTCAGCATAGGGGCAACTCTGAGCAAGAGCTTAAATGGTGGATTGGGGACGTTGTTGGCTGGAGCACTTTCATTGGGGATGGCAGAGTTATCAACATTGGCTGGAAAATGGGAGCAGCTTATAATTATTATATGCATCTTCGTTGTAGGATTTTCTGCCACATACACAAGACTATACCCTTCTTTCAAGCCTTATGAGTACGGGTTCCGCATGTTCTTGATCACGTACTGTTTCATTACTGTATCCGGGTATCAAACAGGGGAATTTGTTGATACCGCTATAAATAGATTTGTCCTCATTGCACTCGGTGCTGCTGTCTCTTTGGTTGTAAATATCTGTATATACCCCATCTGGGCTGGAGAGGATCTGCATAATCTTGTCATAAAAAATTTCATGGATCTTGCAACATCTTTGGAAGGTGTTGTCAGTAACTACCTTCATTGTGTTGAATATAAGAAGGTGCCATCTAAAATTCTTACTTACCAAGCTGCCGAGGATCCAATTTACAATGGATACAGATCGGTTGTTGAATCGACAAGTAAAGAAGATGCATTGATGGGTTTTGCTGTGTGGGAACCACCACATGGTCATTACAAAATGCATAAATATCCATGGAAGAATTATGTGAAATTAAGCGGGTCTCTAAGGCATTGCGCATTTATGGTCATGGCTATGCATGGATGCATACTTTCTGAAATACAGGCCCCAGCTGAGAAGAGACAGGTTTTCCGTGGCGAGCTTCAAAGGGTAGGTTGTGAAGGGGCGAAAGTGTTACGTGAACTTGGAAACAAGGTTCAAAAGATGGAGAAACTAGACCGGGAAGATTTGCTGGATGAAGTGCACGACGCAGCAGAGGAACTGCAAAAGAAGATTGATAAAAAATCATACCTTCTTGTGAATTCAGAGAGCTGGGAAATTGGAAACCGACCAATCGAGGACATAGGCGAAGAAGGAAAAATTCTTGAACACAGCTCTCGTAGTGAAGCAGTACTTGACCTGAGAACAGTTGAAATTGCACATTCGTGGGATGGAAATTTAACTCTGGGCAAGAACCATGTTGTGCCTGCAACGAATACCTCTGAAAACATGTCCAGGAAACAGACATCTTTGCCTGCTCATACTTATCATCAAAAATCAAATGCCGAGATCAAAGAGGGTCAGCAGCTAAAAACTTTCGAAAGTGCTAGTGCCCTGTCTCTGACAACATTTTCATCGCTTCTGATTGAATTTGTGGCAAGGCTTCAAAACTTGGTGGATTCATTTGAAGAACTAGGTGAAACAGCAAACTTTTCTGACCCTCTTGAGCAACGAGAGCCATTAAAATCTCATGGCTTTTGGACCAGGTTGTTTAACTGCTCGAAATTTAAGGACTGA 1719 0.4316 MAPKLVKSGSFRHGLAEKKERLLSGKSSIDISEIGIGMVMQEEEQSRMLKWWSTVKRVAGKALEMGRSDPRKIIFSAKTGLALTLLSLLIFLKEPFKDMSLYCVWAILTVVVVFEFSIGATLSKSLNGGLGTLLAGALSLGMAELSTLAGKWEQLIIIICIFVVGFSATYTRLYPSFKPYEYGFRMFLITYCFITVSGYQTGEFVDTAINRFVLIALGAAVSLVVNICIYPIWAGEDLHNLVIKNFMDLATSLEGVVSNYLHCVEYKKVPSKILTYQAAEDPIYNGYRSVVESTSKEDALMGFAVWEPPHGHYKMHKYPWKNYVKLSGSLRHCAFMVMAMHGCILSEIQAPAEKRQVFRGELQRVGCEGAKVLRELGNKVQKMEKLDREDLLDEVHDAAEELQKKIDKKSYLLVNSESWEIGNRPIEDIGEEGKILEHSSRSEAVLDLRTVEIAHSWDGNLTLGKNHVVPATNTSENMSRKQTSLPAHTYHQKSNAEIKEGQQLKTFESASALSLTTFSSLLIEFVARLQNLVDSFEELGETANFSDPLEQREPLKSHGFWTRLFNCSKFKD* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3136 572 Coils Coil 388 408 - -
Vra7g3136 572 PANTHER ALUMINUM ACTIVATED MALATE TRANSPORTER FAMILY PROTEIN 1 571 - -
Vra7g3136 572 Pfam Aluminium activated malate transporter 64 540 IPR020966 GO:0015743
Vra7g3136 572 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 1 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3136 Vra-Chr7 51144616 51147477 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g3136 7 548 Miscellaneous Gene Families AT3G18440 59.931 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3136 - - gmx:100813638 879.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g0587 1 6878323 6884313 Vra7g3136 7 51144616 51147477 ECH
Vra7g3136 7 51144616 51147477 Vra7g3136 7 51144616 51147477 ECH
Vra7g3136 7 51144616 51147477 Vra1g0587 1 6878323 6884313 PCT