Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3128 ATGCAACGTTTTGTTGATGACGTCCTCGCTGTTACTAAAGAGTCGGTGAAGACGTTTACTTATGAGTCGTTGAACATTATTGTGAGACTGATCAATGGTGTCTCAGCTCTGGTGTTAGCACTGCTACCTGGGAAAGCTAATATACTTGAAGGTATTCAGGGTTGGGAGCTCCGGCCAACTTTTCGTGGACCACGCTTTCCACGTTGGATGGAAAACCAAGAATATTTATCTGGAGAAGAAGGAGAAGAAGAAGAAGACAGTGATGAATATGAAGAATATCCTAAAACTACCTTGTCTCGAAGTTCTAGAGTCCCCAGAGCTGCTTTTGCTGATTACGGTAGACACCAGACGGATTGGATATTGATTCCTCTACAGTTCTTGACACAGTTCTTGATGGGTCTTCCATTTCGTCTTTTCCAATTAGTTTATTCTGGAGTGTCAAAAACGCGATCTATCTCTGGTTGTCAACATCCTTCACAACCACATTCACCCAATGGAGTGCAAAGCCTCAAGGATCAAATTATTCATCGTGCCACTGATAGGAGACGTGGGGTCATAGAGGATCTTCATTTGGCCATGGAGATATTTATAGAGGTTGTTTTTGATGTTATTCACAAGTCTATACATGTTCTCTTTTCCCCATCAGAAGCTCTTGGAACTTTATTCAGGTTGTTTTCATCTCATGAAAGGCCCATTTTAGTTGATAATGATGTTGTTGAGGATGCATCTGTTTCTTCAGCACCTGCAGAAAGGAATACTAGTTTTCGTTCGTCTCTGAACACAGATGCCCGGACATGTCAAGATGTTATAACAGAGCTAGGGTATCCATACGAAGCTATTCGTGTGATCACTGCCGATGGATACGTTCTTCTTCTAGAAAGAATTCCTAGGCGACATGCACGTAAAGCTGTTTATCTTCAGCATGGAATCTTTGATTCATCAATGGGTTGGGTATCTAATGGTGTTGTTGGCTCTCCCGCCTTTGCAGCCTATGATCAAGGCTTTGATGTATTTCTGGGAAATATTCGTGGCCTGGTTTCTAGGGAACATGTCAACAAGAATATCTCCTCTCGTGAATACTGGAAGTATTCCATCAATGAATATGGGACGAAGGATATTCCTGCTTTGATTGAGAAAATCCATCAAGTAAAAACTGCTGAATTGAGGCTTAGTAAGCCTGATATTGAGGAGGAAAGTAATGACGATCAACTTTATAAGCTCTGTGCAATTTGCCATAGCTTGGGAGGAGCTTCTATGTTAATGTATGTTGTCACGCGTAGGTTAAAATCAAAGCCCCACAGACTTTCAAGATTGGTTTTGTTATCACCTGCTGGTTTTCATCATGACTCAAGCCTACTCTTTTCTGCGGTGGAGCATGTGTTGTTTTACCTGGGCCCTATTTTATCTCGTATATTCCCAGCCTTCTATGTACCAACAAGGTTTTTCCGTATGCTTGTTAACAAGTTAGCTAGGGACCTGCAACACCTACCTGCAGTTGGAGGATTGGTTCAAACTTTAGTAGCTTATGTTGCTGGCGGGGACAGCTCAAATTGGGTTGGGGTTTTAGGATTACCCCATTACAACATGAATGATATGCCAGGAGTATCGTTTGGTGTTGCTCTCCATCTTGCACAGATGAAACGTACTAGAAGATTTAGAATGTTTGATTATGGGAATGCATATAATATGAAAATATATGGTTCCCCTGAGCCTTTGGACTTGGGTGAACATTATGGACTCATCGACATTCCTGTTGATCTGGTTGCTGGTCAGAGAGACACGGTAATACGATCTTCAATGGTAAAGAGACACTATAAATTGATGAAGGATGCTGGTGTGGATGTGTCATATAATGAATTTGAATATGCTCATTTGGATTTTACCTTCTCTCACCGTGAAGAGCTTTTGTCTTATGTTATGTCAAGTTTGCTGCTTGTGAAGCCCAATTCAAAGAAACATCAAAGGACTCCAAGATCGAGGGGGAAAGGCCAGGCTTCAGTAAGAGGGTAA 2010 0.4169 MQRFVDDVLAVTKESVKTFTYESLNIIVRLINGVSALVLALLPGKANILEGIQGWELRPTFRGPRFPRWMENQEYLSGEEGEEEEDSDEYEEYPKTTLSRSSRVPRAAFADYGRHQTDWILIPLQFLTQFLMGLPFRLFQLVYSGVSKTRSISGCQHPSQPHSPNGVQSLKDQIIHRATDRRRGVIEDLHLAMEIFIEVVFDVIHKSIHVLFSPSEALGTLFRLFSSHERPILVDNDVVEDASVSSAPAERNTSFRSSLNTDARTCQDVITELGYPYEAIRVITADGYVLLLERIPRRHARKAVYLQHGIFDSSMGWVSNGVVGSPAFAAYDQGFDVFLGNIRGLVSREHVNKNISSREYWKYSINEYGTKDIPALIEKIHQVKTAELRLSKPDIEEESNDDQLYKLCAICHSLGGASMLMYVVTRRLKSKPHRLSRLVLLSPAGFHHDSSLLFSAVEHVLFYLGPILSRIFPAFYVPTRFFRMLVNKLARDLQHLPAVGGLVQTLVAYVAGGDSSNWVGVLGLPHYNMNDMPGVSFGVALHLAQMKRTRRFRMFDYGNAYNMKIYGSPEPLDLGEHYGLIDIPVDLVAGQRDTVIRSSMVKRHYKLMKDAGVDVSYNEFEYAHLDFTFSHREELLSYVMSSLLLVKPNSKKHQRTPRSRGKGQASVRG* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3128 669 MobiDBLite consensus disorder prediction 76 97 - -
Vra7g3128 669 MobiDBLite consensus disorder prediction 76 91 - -
Vra7g3128 669 Pfam Partial alpha/beta-hydrolase lipase region 267 321 IPR006693 GO:0006629
Vra7g3128 669 PANTHER LYSOSOMAL ACID LIPASE-RELATED 8 653 - -
Vra7g3128 669 SUPERFAMILY alpha/beta-Hydrolases 264 639 IPR029058 -
Vra7g3128 669 Gene3D alpha/beta hydrolase 255 643 IPR029058 -
Vra7g3128 669 PANTHER ALPHA/BETA HYDROLASE FAMILY PROTEIN 8 653 - -
Vra7g3128 669 MobiDBLite consensus disorder prediction 649 669 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3128 Vra-Chr7 51079591 51083641 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g3128 1 652 Lipid Metabolism Gene Families AT1G18460 60.411 0.0 819
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3128 - - vun:114175978 1201.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g3128 7 51079591 51083641 Vra7g3128 7 51079591 51083641 ECH
Vra7g3128 7 51079591 51083641 Vra1g0574 1 6717118 6722691 PCT