Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2866 ATGCAACGCAATAGTACTACTGAGTTGGAGGAAGGAGAGGCTTTCTATTGTTATGAGGATGAGGATGATGACAACATTGACCTTGATTCTCTCTCTTACATTGATGAGAGGATTCAGCATGTTCTGGGTGATTTCCAAAAGGAATTTGAAGGAGGTATTTTTCCTGAGCGTTTGGGTGCAAAATTTGGTGAATATGGCTCCTTTTTACCCACCTATGAACGCTCGCCTCGGTTGCGATCAGGTCCAAAGGCTCCAGAAAAACCCAACAGTTCACAAAATATTCCCAGCAATATCCACACCACGGCTGCAATTTATAACTCAAGAGCACCTCCAAATACGACTCCTTCCACGAGGCTTGGAACTGCTTCCCCTATTGTTCTTCCATCTCGAGATACAGGAGTACCTTCAGAGAAGAACACAGGCATTTCCTCGAATAGAGTAACAGGGAAATGCAGTTTGAAAGAGGACTTTGCAAATAAGGCAGAAAAGTTGACCAAGCAAAGAACGCCACAAATCAAAGTAAAATCAGATAACTTAGCAAAAAAGAATGCTGCAATTTACAGTGGACTTGGGCTTGATGGCTCTCCATCCTCTTCGACAGAAAACAGCCAAAAGGAAGTTGAAGATTCGCCACATGTATCTCAAGAGATGCCTGAAGAATCTTGCACTAGCATTATTCAGGTTATGACTTCTTTCACTATCCCTGGAGGTGTACTAATATCACCTCTACATGACAGTCTACTCAACTTGATTAGAAAGGGCAAAGCCCTTGGAGACAGTAGACCCATGTCTTCTCTTAATGGTCATCAGGAGCATTATTCCATGTCTACTGATGAATCAGATTCCTTGGTCAGGGATTCACATTTGTTGAAGAAAAGGAAACTGACAGCGGTAGACCAAAGTGAAAAGCATCATATGAATGGTAACTGTTATGAGAATGACATGACATCTCATACGAAGAAAAGATTAGCAAATAGAACTCCAGATCGAAAGGACTTTCTGTCTAATGGTCTGAGATGCACACCACTGTCAAGTTCAATTTGTGATGCTGGTGAAACAGCTGAAGTCGCTGGTAAGGCTATTGAAGTATCCAAGGAGGTCAATAAAAATGGTGTGGAATGTAGAATGGATTCCATAGAAGTAGTGAAGGAGGTTTCATTGGAGTCAATATCTGATCAGGATTTTGACAAGGTTGTAAAACGAAATACAGGACGTAGCTTTGGGAAAAAAGTGTTAGAGCATAAAATGGAAATGTCTCAGGATAACAATTCTGCTGATCCTAAGAATAGTAGAAATTGTAACACTTCTGCTATTTCAAAAAGGTTTAACTCTGATGAAATGAAACGTGAGGTGGATCAAGATACTAAAAAATTTGAGACTAATCAGACCAAGGTAAAATCTGCAAGCAAGAACAACTTAAAAGGCGAACAGGGACCTATAAAAGTTATGGCCGATGCCAAAAAAGGTGTCATTGGTTCTAGTGATAGAGCAATGGTAAATGATAGAAAGAGTACTGGCATTGGTGTTACTTCTTCTAAAATTGAAATGCATAAAATGAAACTGATGGGTAATAAGGTGAGAGATTGTGACAGAGGTTCACTGAAAAGAAAAAAATTACAACTGAAGCTTGATGGAATAGATCCAACTGATGGGCCTCCCCTTAATAAGGATACAGTAAATGCTGACCTTTACCATGCTAAAAAGAGTGCAAATGAGGTTAAAGTAAAGGAAAAACCAAGTGGCAATAAAGTTGTTTATCAGTTGTCTGCTGTGCCATGCGTAAAAGATGCTCCAGGCACATTTCCTGTTGCTGAAAATAAACCCACTTCTGAGATGGTTCTGTCAGCAGCAGCAGCACCTCAACTTATTGAAGAAGATTGGGTTTGCTGTGACAGTTGCCAGAAATGGCGGCTTCTACCTATGGGTTTAAAGCCAGAGCAGCTTCCAGAGAAGTGGTTGTGTAGCATGCTATATTGGCTGCCTGGAATGAATCGGTGTAACATCAGCGAGGAGGAGACAACAAAATCACTTTATGCTTTATATCAAATTCCGATTTCTGAGGGTCAAAATAACATGCAAAGCCATGTCACTGAACCCAAAATTGGAGTGAAGTCTATTGATACTCTACAACTTTTCCATGTTGACAAAAAGTCCAGTTCTGATGTAATGCTTGATCGGGGAAACAAGAAACATGGTATTCATGAAAAGGCAAAGCCAGGACTCAACATTGACAGGCATCAGTTGTCAAATACAGTAAAGAATGGTCAAGAGTCAAATGTTAAAAATAGAAGCTTGAATGACATGAATCAGCGGTCTGCAAACTCAAACCGTATGAAGAAATCTAATTCTCAAAATTTGAACAGGTTGAACAATTTCAAAGAAGATAAAAAAGCGCTTAAGGCAAAAGAATATCAAATTAATGGAGGTGACAAACAGGTTAGATTGAAGCGTAAGATGGAGGATAATCAACATGGATCTGGAACTCATAAGAAATCTAAGATTGAAGTTGTTGGCAATGCTGATAAACATCTGAAACACGGTATGGACTATAAAAAGGTAGGTCTAAACTCAAGAAATGACTTACCAACAAAGGCTAGTGGGGAAAATACAACGAGATATGATGATTATTGTTCGTCTGATGATAACAAGTTTGTAGTTCCGGTAAAGAAGGGAGATGGGGCACAGTTTTCATCTGATGATGGTTCGTTGGATGCTACAAACAGCAGGCAAAGTGGTTCGGTCAAAGAAAGAAAAATGAGTGACTGGCGGGATAATGAGAAACATAACGAAACATTGTATATGGAAGGTGACATGCATCGTGTTAAAAACAGCAATGTAAATAAGAAACAGAAGTATACAGTTTTGAATACAGAGGCAAAACCAGTAATTGAAAGTGATGACGAATTTATTAAAGAAAGTAAGATGAAGCGTGCTTTCTTGCCAGCCAGCAGGGACAAAATGTCTACTGGGACAGAGGTGAAAAGTGATATCAATATGGCCCGCCAGCCTAGAAAGCACAAAAAAAATGTTGCTTCTTACCAAGCTTTGGATTGTTTTGATCCATCAGGTGGGGATTTAGGCTCTGGAAAATTTTCATTGGCAGCAACTTCAAGTTCTTCTAAGGTTTCTGGGTCTCGCGAAGCTAGAACTAAGCTTGAAAAGGCCATAGGCTCACCAGTAGAATCTGTTACCTCATCACCTTTGAGGACTTCCAACATCGAGAAATGTATTTATGCTGCAGGGTTGGACACATCAGAAAAAGATGATGCTAGAAAAGGTGGTTTATCAATAAAAAACTTAGATAGTAGGGAGAAAAAGTTATCAGTAAAAAAGGAGAGAGTTTCACTTGACAAACATCTTGCACGTGTTAATTGTGGCAGTGGTTCACGTCATGAAGAGAAAATGAACAAGAGTAATCAGGAAAATGCACTTTCTTGGCAGAAGTCTGGTAGGCTCACATCATTACGGGTCAAGCAAAAGGTTAGAACTTCTGGTTCTGAGGTGAGTAGGGATAAGATGAAGGTTTCAGTATCAGATAATGATTTTTCCAAAAATGGTGTGAGTTATGAGTCAGCAGTTCATCCTAATAATCACACTTCTGGTACTGAGACAAGTCATGATGATAAGCACGTCTTTCTGAAGTCTAAACCCAATATTGACAACCTTAGCAAGCAAAATCCTCCTAGGCATTGGTCAGATGAAACTGGAAAACAAACTGAGCCAACACAAAATGATTTTGGGAATCCAATTTTGAAAAGGGAACCGTTACATTTGGGTTCTAGAACTGCACCCAAATCGCAAAAAGGAGATATGTTTATTGGGCATCCGGTCCATGCATCTGGCAATGGTGATGTTCCTAGGCTTGTGAGAAATGCAGTTGATGTTAGTTGCAAGGCTGGAGATGATCACAGTTTAGGAAGTTTAGTACCTGACAGACAGCTCAGTGGCTCAAGTCCCGTAACAACAAATTCTAGCCAAACTGCCTCTGGCATTCTGGAAGAAGCCACAAAGCTAAAGGATTCTGCAGATCATTATAAGAACTCTGGTTTTGAGTTTGAAAGTAACGAGACTTATTTTAAAGCTGCCTTAAAGTTTCTGCACGGAGCATCACTTATAGAAAAATCCCACAGTGAAATTAGCAAGCAGGGAGAGATGAATCAAATGGAAATTTATGCTGCTACAGCTAAACTTTTTGAATCCTGTGCCCATAAATATGAAAGACGCCAAGAAATGGCCGCAGCTGCATTGGCCTATAAATGCATGGAGGTGGTATACATGAGATTGGTTTACAATAAACATTCTACCATAAACAGGGATCGTGATGAGTTAAAATCAATTCTAAAAATGGTTTCTCAAGGTGAATCTCCTTCTTCTTCGGCATCTGATATTGATAATTTAAATAACGTGGGGGCAGTGGATAGGACTACTTTGACAAGGGGTTATAGTACTCTTGCTGCTAACAATCAAGTCATATCTGCTCAGAATCGCCCAAATATTGTCAGGCTTCTTGATTTTACTCAAGACATAAATTTTGCAATGGAGGCTTCCATAAAATGCAAGAGCACTTTCATGGCTGCTAATTTGAACATGGATGAAGCACGGAATAGGGATTGCATAACTTCGATTAGGAAGGTTATTGATTTCAGCTTCCAAGATGTAGATGAGCTTGTACATCTGGTGATGATTGCAACAAAAGCAATGACTCGAGCTGGTCTTGGTGGTGTTAGAGATTAA 4734 0.3969 MQRNSTTELEEGEAFYCYEDEDDDNIDLDSLSYIDERIQHVLGDFQKEFEGGIFPERLGAKFGEYGSFLPTYERSPRLRSGPKAPEKPNSSQNIPSNIHTTAAIYNSRAPPNTTPSTRLGTASPIVLPSRDTGVPSEKNTGISSNRVTGKCSLKEDFANKAEKLTKQRTPQIKVKSDNLAKKNAAIYSGLGLDGSPSSSTENSQKEVEDSPHVSQEMPEESCTSIIQVMTSFTIPGGVLISPLHDSLLNLIRKGKALGDSRPMSSLNGHQEHYSMSTDESDSLVRDSHLLKKRKLTAVDQSEKHHMNGNCYENDMTSHTKKRLANRTPDRKDFLSNGLRCTPLSSSICDAGETAEVAGKAIEVSKEVNKNGVECRMDSIEVVKEVSLESISDQDFDKVVKRNTGRSFGKKVLEHKMEMSQDNNSADPKNSRNCNTSAISKRFNSDEMKREVDQDTKKFETNQTKVKSASKNNLKGEQGPIKVMADAKKGVIGSSDRAMVNDRKSTGIGVTSSKIEMHKMKLMGNKVRDCDRGSLKRKKLQLKLDGIDPTDGPPLNKDTVNADLYHAKKSANEVKVKEKPSGNKVVYQLSAVPCVKDAPGTFPVAENKPTSEMVLSAAAAPQLIEEDWVCCDSCQKWRLLPMGLKPEQLPEKWLCSMLYWLPGMNRCNISEEETTKSLYALYQIPISEGQNNMQSHVTEPKIGVKSIDTLQLFHVDKKSSSDVMLDRGNKKHGIHEKAKPGLNIDRHQLSNTVKNGQESNVKNRSLNDMNQRSANSNRMKKSNSQNLNRLNNFKEDKKALKAKEYQINGGDKQVRLKRKMEDNQHGSGTHKKSKIEVVGNADKHLKHGMDYKKVGLNSRNDLPTKASGENTTRYDDYCSSDDNKFVVPVKKGDGAQFSSDDGSLDATNSRQSGSVKERKMSDWRDNEKHNETLYMEGDMHRVKNSNVNKKQKYTVLNTEAKPVIESDDEFIKESKMKRAFLPASRDKMSTGTEVKSDINMARQPRKHKKNVASYQALDCFDPSGGDLGSGKFSLAATSSSSKVSGSREARTKLEKAIGSPVESVTSSPLRTSNIEKCIYAAGLDTSEKDDARKGGLSIKNLDSREKKLSVKKERVSLDKHLARVNCGSGSRHEEKMNKSNQENALSWQKSGRLTSLRVKQKVRTSGSEVSRDKMKVSVSDNDFSKNGVSYESAVHPNNHTSGTETSHDDKHVFLKSKPNIDNLSKQNPPRHWSDETGKQTEPTQNDFGNPILKREPLHLGSRTAPKSQKGDMFIGHPVHASGNGDVPRLVRNAVDVSCKAGDDHSLGSLVPDRQLSGSSPVTTNSSQTASGILEEATKLKDSADHYKNSGFEFESNETYFKAALKFLHGASLIEKSHSEISKQGEMNQMEIYAATAKLFESCAHKYERRQEMAAAALAYKCMEVVYMRLVYNKHSTINRDRDELKSILKMVSQGESPSSSASDIDNLNNVGAVDRTTLTRGYSTLAANNQVISAQNRPNIVRLLDFTQDINFAMEASIKCKSTFMAANLNMDEARNRDCITSIRKVIDFSFQDVDELVHLVMIATKAMTRAGLGGVRD* 1578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2866 1577 MobiDBLite consensus disorder prediction 1310 1328 - -
Vra7g2866 1577 MobiDBLite consensus disorder prediction 133 147 - -
Vra7g2866 1577 Gene3D - 620 676 - -
Vra7g2866 1577 MobiDBLite consensus disorder prediction 443 475 - -
Vra7g2866 1577 ProSiteProfiles Zinc finger CW-type profile. 621 674 IPR011124 GO:0008270
Vra7g2866 1577 MobiDBLite consensus disorder prediction 1163 1178 - -
Vra7g2866 1577 MobiDBLite consensus disorder prediction 750 785 - -
Vra7g2866 1577 MobiDBLite consensus disorder prediction 859 873 - -
Vra7g2866 1577 MobiDBLite consensus disorder prediction 1201 1215 - -
Vra7g2866 1577 MobiDBLite consensus disorder prediction 899 913 - -
Vra7g2866 1577 MobiDBLite consensus disorder prediction 1179 1200 - -
Vra7g2866 1577 MobiDBLite consensus disorder prediction 85 123 - -
Vra7g2866 1577 MobiDBLite consensus disorder prediction 1125 1266 - -
Vra7g2866 1577 Pfam CW-type Zinc Finger 627 672 IPR011124 GO:0008270
Vra7g2866 1577 MobiDBLite consensus disorder prediction 73 147 - -
Vra7g2866 1577 MobiDBLite consensus disorder prediction 1300 1328 - -
Vra7g2866 1577 MobiDBLite consensus disorder prediction 1139 1162 - -
Vra7g2866 1577 PANTHER CW-TYPE ZINC FINGER 1 1571 - -
Vra7g2866 1577 MobiDBLite consensus disorder prediction 443 463 - -
Vra7g2866 1577 MobiDBLite consensus disorder prediction 190 220 - -
Vra7g2866 1577 MobiDBLite consensus disorder prediction 853 876 - -
Vra7g2866 1577 MobiDBLite consensus disorder prediction 261 283 - -
Vra7g2866 1577 MobiDBLite consensus disorder prediction 893 926 - -
Vra7g2866 1577 Coils Coil 782 802 - -
Vra7g2866 1577 PANTHER CW-TYPE ZINC-FINGER PROTEIN 1 1571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2866 Vra-Chr7 48800210 48808706 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2866 - - gmx:100793863 2048.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2866 7 48800210 48808706 Vra7g2866 7 48800210 48808706 ECH
Vra7g2866 7 48800210 48808706 Vra5g0156 5 1250150 1258954 PCT