Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2857 ATGGAACACAGAACGCTGGAACTCAGCCTCGGATCGGCGAAGGATCTGAAAAACGTGAATCTTTTTTCCAGGATGGACGTGTACGCCGTCGTTTCGCTCTCCGGCGTCCAAAAGATCAAGACTCCCGTCGACAGAAACGGCGGCACCAACCCCACGTGGAAAGTTACCGAGAAGTTCACCATCGACGAATCGCTCGCGCGCCAGAACCGCTTGACCATCGAAATCAAGCTCCGCTGCGAACGCAGCCTATCCGCTGACAAAGAAATCGGCCAGGTCCTCGTCCCCATCAGGGAGCTCCTCGACCAACCCGGTGATGGAAAAGCCTTCCAGCATGTCAGTTACCAGGTCAGAAAACCCTCCGGCAAACCCAAAGGATCGTTTAGTTTTTCTTACAGATTTAGCGAAAAATTCACTGCGCCCGGGGTAGCGTCAGCGCCGTCAGCGCCTGTGCTTTCGGTTGCTCCCAAGACGGAGCCGGTGACGGCTTATCCTGCTCCCGCGGTGGGGTCCACTTCTGCCTCGTATCCCGTCGTGTATCCTCCTCCCCAGCAGCCACAATATGCGGGCGGATATGGGTACCCTCCGCCGCCACAGGCGGCATATGGGTACGCTCCACAAGCGGCTTACGGGTATGCGCCGCAACCCGGGTACGGTTACCCTCCTGCTGCTGCTCCGGCTCAAGGAGCTCGGAAGAACAAATTTGGAATGGGATTGGGAGCGGGTTTGCTTGGTGGAGCGTTGGGTGGGCTTCTGATCGGAGACATGATATCTGATGTAGGTTCTTACGATGCTGGCTATGACGCTGGTTTTGGAGATGCCGGTGGATTTGATTTTTAA 837 0.5639 MEHRTLELSLGSAKDLKNVNLFSRMDVYAVVSLSGVQKIKTPVDRNGGTNPTWKVTEKFTIDESLARQNRLTIEIKLRCERSLSADKEIGQVLVPIRELLDQPGDGKAFQHVSYQVRKPSGKPKGSFSFSYRFSEKFTAPGVASAPSAPVLSVAPKTEPVTAYPAPAVGSTSASYPVVYPPPQQPQYAGGYGYPPPPQAAYGYAPQAAYGYAPQPGYGYPPAAAPAQGARKNKFGMGLGAGLLGGALGGLLIGDMISDVGSYDAGYDAGFGDAGGFDF* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2857 278 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 134 IPR035892 -
Vra7g2857 278 PANTHER INGRESSION PROTEIN FIC1 1 270 - -
Vra7g2857 278 PANTHER OS01G0934100 PROTEIN 1 270 - -
Vra7g2857 278 ProSiteProfiles C2 domain profile. 1 109 IPR000008 -
Vra7g2857 278 SMART C2_3c 5 108 IPR000008 -
Vra7g2857 278 Gene3D C2 domain 1 144 IPR035892 -
Vra7g2857 278 CDD C2_SRC2_like 5 129 IPR044750 GO:0006952
Vra7g2857 278 Pfam C2 domain 5 103 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2857 Vra-Chr7 48713206 48714445 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2857 - - gmx:100784458 243.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2857 7 48713206 48714445 Vra7g2857 7 48713206 48714445 ECH
Vra7g2857 7 48713206 48714445 Vra5g0145 5 1175520 1176760 PCT