Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0145 ATGGAATACAGAACCTTAGAACTCAACATCATATCAGCGAAAGACATAAAGAATGTTAATCTTTTCTCGAAGATGGACGTTTACGTCGTCATTTCGCTCACCGGTGACCCTTTTCATCTTCAAAGCGCAACCACCCATGTGGACAAAGATGGCGGATGCAACCCCAAGTGGAACTATCCGGTGAAATTCTCCGTCAACGAAGCGCTGGCAAAGGAGAACCGTTTGACCCTCGAGGCCAAGCTCATCTCCGACCGCACCCTCGGTGACACCGTCATCGGCACCGTCCATGTTCCTCTCAGGGAGCTCGTCGACAACCCCGGCGAAGACAACGGCTTTCGACAAGTCAGTTACAAGGTCGTCAAATCTTCAGGAAAATCCAAGGGATCATTCAATTTCTCTTACAAATTCGCTGAAAAGGTCTCTAATTCCACCGCTGCCGGAAGGATGTCCGCTGCGGCATCAAAAACGGAAACGGAGCCAGTGATGGCTTACCCTCCTCAGACCTCCGCGGGAACAAGTGCAATTCCTTACGGAACATCGCATCCTCCGCCGCCCAACCCGGCTGCACAATATGGATACCCACCCCAACAACCGTCTTACACCGGATACCCACCGGTTAATGGGTATCCACCTCAACAGAGCTACGGTGGATACCCTCCACAACAAAACGGATATGGTGGATACCCACCGCAAAATGGTTATGGTTATGGATATCAAGGGTACCCTCAACAAGGTGGATATGGATACCCACCCGCCCAGAAACCAAAGAAGAACAATTTCGGAATGGGGTTGGGTGCGGGATTGCTTGGTGGTGCTTTGGGTGGTATGTTGATCGGAGATATGGTATCTGATGCTGCGGATTATGAAGCTGGATACGATGCTGGATTTGATGATGCTGGTGGATTTGATTTTTAA 915 0.5016 MEYRTLELNIISAKDIKNVNLFSKMDVYVVISLTGDPFHLQSATTHVDKDGGCNPKWNYPVKFSVNEALAKENRLTLEAKLISDRTLGDTVIGTVHVPLRELVDNPGEDNGFRQVSYKVVKSSGKSKGSFNFSYKFAEKVSNSTAAGRMSAAASKTETEPVMAYPPQTSAGTSAIPYGTSHPPPPNPAAQYGYPPQQPSYTGYPPVNGYPPQQSYGGYPPQQNGYGGYPPQNGYGYGYQGYPQQGGYGYPPAQKPKKNNFGMGLGAGLLGGALGGMLIGDMVSDAADYEAGYDAGFDDAGGFDF* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0145 304 MobiDBLite consensus disorder prediction 178 205 - -
Vra5g0145 304 CDD C2_SRC2_like 5 132 IPR044750 GO:0006952
Vra5g0145 304 Pfam C2 domain 5 106 IPR000008 -
Vra5g0145 304 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 137 IPR035892 -
Vra5g0145 304 Gene3D C2 domain 4 138 IPR035892 -
Vra5g0145 304 ProSiteProfiles C2 domain profile. 1 112 IPR000008 -
Vra5g0145 304 MobiDBLite consensus disorder prediction 168 214 - -
Vra5g0145 304 PANTHER PROTEIN SRC2 1 239 - -
Vra5g0145 304 PANTHER INGRESSION PROTEIN FIC1 1 239 - -
Vra5g0145 304 SMART C2_3c 5 111 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0145 Vra-Chr5 1175520 1176760 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0145 - - gmx:547451 290.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0145 5 1175520 1176760 Vra5g0145 5 1175520 1176760 ECH
Vra7g2857 7 48713206 48714445 Vra5g0145 5 1175520 1176760 PCT