Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2851 ATGGATGCAAACTCCTCCCAAGCTCTTCTTCCCTCAGAGCCATTGATGTATCAGACATGGTTCTTGAAAGTTTCCATCCACTGTCAAGGATGCAGGAGGAAAGTGAAGAAGGTCTTACAGAGCATAGATGGTGTTTTCACCACAACGGTGGACCCGCAGCAGCAGAAAGTGACGGTCACCGGAAGCGTCGGCGTTGAGACACTGATAAGGAAACTGGAGAAAGCCGGAAAACACGCCGAGATTTGGCCGGAGAATCTCGCGGCCGGGAAGGGAAATAACTCCAACAAAGACAAGCAGCAGCAGCAGCAGAAGAAGAAAAAGAAGAAAAACGAACAAGGAGAAGAATCCGAAGGCAAGAATAATCAGTCCACCACAACAAATGCAGTGGCTACCAATACCACAGCGAACACTAGTAAGAAAAAGATGAACGAAAAAAGTTGTGGGGAGAGGGGCAACGGCGAAAGCAAGAGCAGCGGCGGCGGAGAAAATGAGTCAGCAGAATCGGAGAACAAGAGTGGTGAAAGTGAAGGAGTTGGGAAGAAAAAGAAAAAGAAAGGGATGGAGAAAAGTGAGAGTAATGGAAGTTCAGCATGTAACGGTGGAGCTGAGCACAGTGGATCCAGTGGGCAGGTGAATCTGAGCCCTACACGTCAGCAATTCAACCTGTATCCAGAAACTTACTGTTATCCCCCACTTGTGTATCTGGCAACTCACAACAGGTTATGTCCCATGGGAACAATGGGTGGTCCTTCCTACTATGTTTCACCATTGCCCTACATGTGTGCAGGCATAGACCACGACCCTTATCGCCTTCAATCTACGCCCTTGGTTCCCTTCGAGATCTTCAGCGACGAGAATGCAAATGGGTGTTGTATCATGTGA 882 0.4841 MDANSSQALLPSEPLMYQTWFLKVSIHCQGCRRKVKKVLQSIDGVFTTTVDPQQQKVTVTGSVGVETLIRKLEKAGKHAEIWPENLAAGKGNNSNKDKQQQQQKKKKKKNEQGEESEGKNNQSTTTNAVATNTTANTSKKKMNEKSCGERGNGESKSSGGGENESAESENKSGESEGVGKKKKKKGMEKSESNGSSACNGGAEHSGSSGQVNLSPTRQQFNLYPETYCYPPLVYLATHNRLCPMGTMGGPSYYVSPLPYMCAGIDHDPYRLQSTPLVPFEIFSDENANGCCIM* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2851 293 MobiDBLite consensus disorder prediction 80 213 - -
Vra7g2851 293 CDD HMA 22 80 IPR006121 GO:0046872
Vra7g2851 293 ProSiteProfiles Heavy-metal-associated domain profile. 25 81 IPR006121 GO:0046872
Vra7g2851 293 MobiDBLite consensus disorder prediction 191 213 - -
Vra7g2851 293 SUPERFAMILY HMA, heavy metal-associated domain 14 83 IPR036163 GO:0046872
Vra7g2851 293 MobiDBLite consensus disorder prediction 117 141 - -
Vra7g2851 293 MobiDBLite consensus disorder prediction 167 190 - -
Vra7g2851 293 PANTHER HEAVY-METAL-ASSOCIATED DOMAIN PROTEIN 1 293 - -
Vra7g2851 293 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 1 293 - -
Vra7g2851 293 MobiDBLite consensus disorder prediction 152 166 - -
Vra7g2851 293 Pfam Heavy-metal-associated domain 24 78 IPR006121 GO:0046872
Vra7g2851 293 Gene3D - 17 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2851 Vra-Chr7 48657867 48659490 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2851 - - gmx:100808829 300.441
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2851 7 48657867 48659490 Vra7g2851 7 48657867 48659490 ECH
Vra7g2851 7 48657867 48659490 Vra5g0140 5 1145972 1148213 PCT