Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2813 ATGGCTAATGCTCTTGTATGTTATCTTCGCATCAAAGAAAGAGATAATGCAACTGAGCTTCCTGTTTCCAGAAAAGAACATTCTCAGTTCCTTTCACACGTTTTTCTTTCACACACTCAAATCATATTCCAAACTCCAATTTATGTCTCCATTTTCCTTCTCTTCTTCCAAACCTCTCTCTGCACATCATTCTTCTTCTCTGTCGATTCCATGACAGCCGCTGCAATGGCGACGGCCGCCGGAGCGGCGGTGACGTTGTACCTCTTGTTGAGGAGGAGGAAGAAAGCCGAAGAGGAGTGGTCGAGAGCGCGGACCCTGAGGGTGAGGCCAGCTCAGGCGCCGGCGAATCTGTTCGAGTCGATCGTGACGTTGTCGGAGACACTGAGATTCACTTACTCTGAGACTATTGGGAAATGGCCAATAGCAGATTTGGCCTTCGGCATCAATTCTTTCATGCGTAAAAAGGGTGATTTGGCAGTTGCGGGTGTGTATGGTGGAAATGGTTGTGTGGAGTTGAAAGGCCCTGAAGTTGTAGCCGACTTAGAGGAACTATTGAGGCTGTTGACTCTGTGTATGTTTTTCTCCAAAAAACCGTTTCCCGAATTTTTAGATTCTGCTGGATTCTCACAGGACCATGTCCTTCTCCACAGCCCCAAAGCTGAGCTTCTGAAGCCTGCATTCACTATTATACATGATATGCAGTCAAGATGTTTTCTTCTGTTGATCCGGGGAACTCATAGCATAAAAGACACACTGACAGCTGCAACTGGTGCTATGGTTCCTTTTCACCATTCCATTGTAAGTGATGGACAAATTAGCAACTTGGTTTTAGGACATGCACACTGTGGTATGGTTGCTGCTGCTCGTTGGATTGCAAAACTCTGCATTCCTGCATTACTTAAAGCACTTAATGAATGTCCAGACTCAAAAGTCAAGGTTATTGGACACTCACTTGGTGGTGGTACTGCATCACTGTTGACATATATTCTTAGAGAACAAAACGAGTTATCTTCAAGCACCTGTGTCACATTTGCTCCAGCCGCCTGTATGACATGGGAGTTAGCTGAATCAGGGAAGCACTTCATCACCACCATTATAAATAATTCCGACATGGTGCCCACATTATCATCTTTCTCTGTTGACAATCTTCGTTCTGAGGTTGCTGCATCATCTTGGTTGAATGATTTATGGAATCAGGTTGAGCATACAAAGGTTCTGAATGTCATCTATCGCTCTGCAAGTACCCTTGGATCTCATTTACAATTTATATCCAGTGCAAAAGGAAAGGTAACTGGTGTAGGTGCTATTCTACTGCCAGTAGCCAGTAGTACCCAGGTTGTGATAAAGCATGCACAAAGTGTTGCAAAAGCTGTTGTTAAAACTATGACTGCACACAGTCAGAATATTGGTCCCCTGTCGAAATCTAAATTAAATAAGTTGGTCAAAATTTCTCTTGAAGCAGAAAATATAAGTAAATCTCTTTTGACCGAAAGTGTGTCTGTACTTAATAAAGATGAACCAAACTCCTCTAGTGGAAAATCCGAACTTGATGACGCAGATGAAGAGGAATTAGTCATTCATGCCAATGAACACATTACAGAAGGTGAATTGTGGCATGAACTGGAGAAGGAACTTGAAAAACAGAATATATTGAACATCCTGACTCAGGTAGAAGAAGCAGATACAGAAAATGAGATAATTGAGGAAGATCAGCTTGTTAATGCTAGCAATTCAATGTCAACATCTGGCCTTCTAGATAGTTGTTTTTATCCCCCAGGTAAAATTATGCATATTGTCTCTGCACCTCCTGATGAATCTAGTTCAAACTCCAAGGAGGAACGTATCAAATTATATGAAACACCAAGACAGCTGTATAGCAAGTTCAGACTTTCAAAAAATATGATAAATGATCATTACATGCCAACATATAGAACAATGATCCAACTATTAATCCAGCAATTAAAGAAAGATGGTTTCAAATAG 1983 0.417 MANALVCYLRIKERDNATELPVSRKEHSQFLSHVFLSHTQIIFQTPIYVSIFLLFFQTSLCTSFFFSVDSMTAAAMATAAGAAVTLYLLLRRRKKAEEEWSRARTLRVRPAQAPANLFESIVTLSETLRFTYSETIGKWPIADLAFGINSFMRKKGDLAVAGVYGGNGCVELKGPEVVADLEELLRLLTLCMFFSKKPFPEFLDSAGFSQDHVLLHSPKAELLKPAFTIIHDMQSRCFLLLIRGTHSIKDTLTAATGAMVPFHHSIVSDGQISNLVLGHAHCGMVAAARWIAKLCIPALLKALNECPDSKVKVIGHSLGGGTASLLTYILREQNELSSSTCVTFAPAACMTWELAESGKHFITTIINNSDMVPTLSSFSVDNLRSEVAASSWLNDLWNQVEHTKVLNVIYRSASTLGSHLQFISSAKGKVTGVGAILLPVASSTQVVIKHAQSVAKAVVKTMTAHSQNIGPLSKSKLNKLVKISLEAENISKSLLTESVSVLNKDEPNSSSGKSELDDADEEELVIHANEHITEGELWHELEKELEKQNILNILTQVEEADTENEIIEEDQLVNASNSMSTSGLLDSCFYPPGKIMHIVSAPPDESSSNSKEERIKLYETPRQLYSKFRLSKNMINDHYMPTYRTMIQLLIQQLKKDGFK* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2813 660 Pfam Lipase (class 3) 240 377 IPR002921 GO:0006629
Vra7g2813 660 Gene3D alpha/beta hydrolase 189 422 IPR029058 -
Vra7g2813 660 PANTHER LIPASE CLASS 3 PROTEIN-LIKE 71 657 - -
Vra7g2813 660 PANTHER LIPASE CLASS 3 FAMILY PROTEIN 71 657 - -
Vra7g2813 660 CDD Lipase_3 196 381 - -
Vra7g2813 660 Pfam Lipase 3 N-terminal region 108 185 IPR005592 GO:0016042
Vra7g2813 660 SUPERFAMILY alpha/beta-Hydrolases 204 378 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2813 Vra-Chr7 48346030 48352857 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2813 71 657 Acyl Lipid Metabolism Gene Families AT4G16070 53.566 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2813 - - gmx:100801263 885.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2813 7 48346030 48352857 Vra7g2813 7 48346030 48352857 ECH
Vra7g2813 7 48346030 48352857 Vra5g0105 5 834306 839067 PCT