Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0105 ATGGCGGCGGGGACAATGGCGACGGCGGCCGGGGCGGCGGTGATGCTGTTTTATGTGCTGAGCCGGCGGCTGTCACGGAAGGTGGAAGAGGACAGCGAGGATCACGGAGGGGGCGGCGATGTCTCGAAATCTAGCAGATCGGTGCGCCGGAGAAGGCTTTCGAGGCGGCCGGCGCAGGCTCCGGCGACGCTGCTGGAGTCGATCGGAACGCTGTCGGAGACTTTGAGGTTCACGTATTCCGAGACCTTCGGGAAGTGGCCAATCGGCGATTTGGCCTTCGGAATCAACTACTTCATGCGCAAGCAGGGTAATTTGGCAGTTGCAAGTGTCTATGCTGGGAGTGATTCTGTGCAGCTCAAAGGGGATGAGATAATTGTGGAGCTGTACGAGTTGTTGAGGCTTTTGACTCTGTGTATGCTTTTCTCTAAGAAGCCATTTCCTGTGTTTTTAGACTCTGCTGGGTTTTCCCTTGATGATGTGCTCATTCAGAAACCGAAAGCTGGGCTTCTGAAGCCTGCATTTACGATTATATGTGATACACAATCAAAATGTTTACTTCTACTGATCCGGGGTACTCATAGCATAAAGGACACCCTGACAGCTGCAACTGGTGCTGTAGTCCCTTTTCACCATTCAGTTTTAAATGACGGTGGGATCAGCAACTTGGTTTTGGGATATGCACATTGTGGCATGGTTGCTGCTGCTAGATGGATTGCAAAGCTTTGCACTCCTACCCTACTTAAGGCTCTTGAGGAATTTCCAGACTTCAAAGTCAAGATTGTTGGGCACTCACTTGGCGGTGGTACTGCTGCACTATTGACCTATATTCTTAGAGAGCAGAAAGAGTTCTCTTCAAGCACATGTGTCACTTTTGCTCCAGCTGCCTGTATGACATGGGAGTTAGCAGAATCAGGAAAACACTTTATTACAACCATTATAAATGGTTCTGATTTGGTGCCAACATTTTCAACTTCATCCATTGATGATCTCCGATCTGAGGTCACTGCATCATCTTGGTTGAATGATTTACGGGATCAGGTTGAACATACGAAGGTCCTGAATGTTGTCTACCGATCTGCAACTGCACTTGGATCTCGCTTACCATCTATTTCCAGTGCAAAAGCTAGGGTGGCTGGTGCTGGTGCTATTCTATGGCCAGTAACCAGTGGCACACAGGTTGTGATGAGGCGTGCACAGAGTGTTGCTGAGGCTGTTGTCAGAACTCGGTCATCACTGTCATCATGGTCTTGCATGAGTGCACGCCGCAGAAATGTGGGTCAATCAGTAAACTCTAAATCAGAGGATTTAACTGAAGCATCTCTAATATCTGCAAGGAACACAGAATCTGTTATGACTGAAGAGGTAGTAGTAGAACCTATGCTTAAGGATGAAAATACATCCTCAAGTGGAGGATCTGGCCATGATGACACAGATGAAGAAGAGCCTCTCATTCCTGCTAATCAAGACATCACTGCAACAGCTGTTGAGGAATTAACAGAAGGCCAGTTATGGTATGAGCTAGAGAAGGAGCTTCAAAAGCAGGATAATGTTATGAACATTCATGCTCAAGAAGAAGAGGCCGCAGCAGCAAAAGAGATTACAGAAGAAGAGAGTCAACTTGTTGATGCTGCTGCAGAATGCAGTAGCAGTTCAATCACTACATCAGACAACTTGGACAGCCATCGATTTTATCCCCCTGGCAGGATCATGCATATTGTTCCTGTACCTTCATCGGATGAATCAAATTCAAATTCTGATGACCCTATAGAAGAACATGTCTGCTTATATGAAACTCCCAGAGAGCTGTACAGCAAGCTCAGACTTTCAAGAACCATGATAAATGATCATTACATGCCAATGTATAAGAAGATGATGGAACTATTAATACGAGAACTAGAGAAAGATAGCAACTGTAATATCTTGAATTAA 1929 0.4619 MAAGTMATAAGAAVMLFYVLSRRLSRKVEEDSEDHGGGGDVSKSSRSVRRRRLSRRPAQAPATLLESIGTLSETLRFTYSETFGKWPIGDLAFGINYFMRKQGNLAVASVYAGSDSVQLKGDEIIVELYELLRLLTLCMLFSKKPFPVFLDSAGFSLDDVLIQKPKAGLLKPAFTIICDTQSKCLLLLIRGTHSIKDTLTAATGAVVPFHHSVLNDGGISNLVLGYAHCGMVAAARWIAKLCTPTLLKALEEFPDFKVKIVGHSLGGGTAALLTYILREQKEFSSSTCVTFAPAACMTWELAESGKHFITTIINGSDLVPTFSTSSIDDLRSEVTASSWLNDLRDQVEHTKVLNVVYRSATALGSRLPSISSAKARVAGAGAILWPVTSGTQVVMRRAQSVAEAVVRTRSSLSSWSCMSARRRNVGQSVNSKSEDLTEASLISARNTESVMTEEVVVEPMLKDENTSSSGGSGHDDTDEEEPLIPANQDITATAVEELTEGQLWYELEKELQKQDNVMNIHAQEEEAAAAKEITEEESQLVDAAAECSSSSITTSDNLDSHRFYPPGRIMHIVPVPSSDESNSNSDDPIEEHVCLYETPRELYSKLRLSRTMINDHYMPMYKKMMELLIRELEKDSNCNILN* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0105 642 MobiDBLite consensus disorder prediction 29 47 - -
Vra5g0105 642 Gene3D alpha/beta hydrolase 158 359 IPR029058 -
Vra5g0105 642 PANTHER LIPASE CLASS 3 PROTEIN-LIKE 1 636 - -
Vra5g0105 642 SUPERFAMILY alpha/beta-Hydrolases 158 325 IPR029058 -
Vra5g0105 642 MobiDBLite consensus disorder prediction 29 58 - -
Vra5g0105 642 MobiDBLite consensus disorder prediction 461 481 - -
Vra5g0105 642 CDD Lipase_3 178 329 - -
Vra5g0105 642 Pfam Lipase (class 3) 187 323 IPR002921 GO:0006629
Vra5g0105 642 PANTHER LIPASE CLASS 3 FAMILY PROTEIN 1 636 - -
Vra5g0105 642 Pfam Lipase 3 N-terminal region 52 126 IPR005592 GO:0016042
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0105 Vra-Chr5 834306 839067 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0105 1 637 Acyl Lipid Metabolism Gene Families AT4G16070 66.069 0.0 763
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0105 - - gmx:100782138 1078.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0105 5 834306 839067 Vra5g0105 5 834306 839067 ECH
Vra7g2813 7 48346030 48352857 Vra5g0105 5 834306 839067 PCT