Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2807 ATGGGAATCACAACCTACACACAGGAATATTCTTCCACTGTTGCCCCATCACGCATGTTCAAGGCCTTGATTGTAGACTCCAAGAATTTGCTTCCAAAGCTCTTACCTCAGTTTGTAAAAGATGTGAATGTAATCCAAGGTGATGGAGAAGCTGGAAGCATTGAACAAGTGAACTTCAATGAAGCTAGCCCTTTCAAATATCTGAAACACAGGATTGATGTGCTTGATAAGGAAAACTTGGTTTGCAAATACACTATGATTGAAGGGGATCCTTTAGGTGACAGACTTGAGTCTATAGGTTATGAGGTAAAGTTTGAGGCCACTAGTGATGGAGGTTGCCTCTGCAAAATGACTAGCAATTACAATACCATTGGGGAGTTTGATGTTAAAGAGGAAGAACTAAAGGAAGGAAGGGAGAGCACTATTGCAATTTACAAAGTTGTGGAGTCATACCTGCTGGAGAATCCACAAGTATATGCATAA 483 0.4058 MGITTYTQEYSSTVAPSRMFKALIVDSKNLLPKLLPQFVKDVNVIQGDGEAGSIEQVNFNEASPFKYLKHRIDVLDKENLVCKYTMIEGDPLGDRLESIGYEVKFEATSDGGCLCKMTSNYNTIGEFDVKEEELKEGRESTIAIYKVVESYLLENPQVYA* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2807 160 PRINTS Major pollen allergen Bet V1 signature 3 23 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Vra7g2807 160 PRINTS Major pollen allergen Bet V1 signature 26 36 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Vra7g2807 160 PRINTS Major pollen allergen Bet V1 signature 50 59 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Vra7g2807 160 PRINTS Major pollen allergen Bet V1 signature 66 85 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Vra7g2807 160 PRINTS Major pollen allergen Bet V1 signature 85 98 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Vra7g2807 160 PRINTS Major pollen allergen Bet V1 signature 110 126 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Vra7g2807 160 PRINTS Major pollen allergen Bet V1 signature 144 154 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Vra7g2807 160 PANTHER - 1 160 - -
Vra7g2807 160 CDD Bet_v1-like 5 152 - -
Vra7g2807 160 Gene3D - 1 160 IPR023393 -
Vra7g2807 160 SUPERFAMILY Bet v1-like 3 159 - -
Vra7g2807 160 Pfam Pathogenesis-related protein Bet v 1 family 1 154 IPR000916 GO:0006952
Vra7g2807 160 PANTHER PATHOGENESIS-RELATED PROTEIN BET V I FAMILY PROTEIN 1 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2807 Vra-Chr7 48304527 48305581 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2807 - - gmx:100527307 306.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2807 7 48304527 48305581 Vra7g2807 7 48304527 48305581 ECH
Vra5g0101 5 799958 803881 Vra7g2807 7 48304527 48305581 PCT