Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2806 ATGGCTGTTTTCACATTCGACGACCAAGCCACTTCTCCTGTGGCTCCTGCCACCCTCTACAACGCTCTTGCTAAAGACGCCGACAACATCATCCCAAAGGCTGTTGGTTCCTTCCAGAGTGTTGAAATCGTCGAGGGCAACGGTGGTCCCGGAACCATCAAGAAGATCTCTTTCGTTGAAGATGGAGAGACAAAGTTTGTGTTGCACAAAATAGAATCAGTAGACGAGGCAAACTTGGGATACAGCTACAGTATTGTTGGAGGTGTTGCCTTGCCAGACACTGCAGAGAAGATCACAATCGACACTAAAATCAGTGACGGTGCCGACGGAGGATCACTTATAAAGCTGACCATATCTTACCATAGCAAAGGAGATGCACCACCCAACGAAGATGAGCTCAAGGCTGGCAAAGCCAAGAGTGATGCACTTTTCAAGGCTGTTGAAGCTTACCTTTTGGCCAATCCCTGA 468 0.4829 MAVFTFDDQATSPVAPATLYNALAKDADNIIPKAVGSFQSVEIVEGNGGPGTIKKISFVEDGETKFVLHKIESVDEANLGYSYSIVGGVALPDTAEKITIDTKISDGADGGSLIKLTISYHSKGDAPPNEDELKAGKAKSDALFKAVEAYLLANP* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2806 155 SUPERFAMILY Bet v1-like 4 155 - -
Vra7g2806 155 PANTHER - 1 155 - -
Vra7g2806 155 CDD Bet_v1-like 4 151 - -
Vra7g2806 155 Pfam Pathogenesis-related protein Bet v 1 family 1 154 IPR000916 GO:0006952
Vra7g2806 155 Gene3D - 1 155 IPR023393 -
Vra7g2806 155 PRINTS Major pollen allergen Bet V1 signature 3 23 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Vra7g2806 155 PRINTS Major pollen allergen Bet V1 signature 26 36 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Vra7g2806 155 PRINTS Major pollen allergen Bet V1 signature 49 58 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Vra7g2806 155 PRINTS Major pollen allergen Bet V1 signature 65 84 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Vra7g2806 155 PRINTS Major pollen allergen Bet V1 signature 84 97 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Vra7g2806 155 PRINTS Major pollen allergen Bet V1 signature 109 125 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Vra7g2806 155 PRINTS Major pollen allergen Bet V1 signature 143 153 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Vra7g2806 155 PANTHER ABA-RESPONSIVE PROTEIN 1 155 - -
Vra7g2806 155 ProSitePatterns Pathogenesis-related proteins Bet v I family signature. 88 120 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2806 Vra-Chr7 48291052 48291927 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2806 - - vun:114177054 261.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2806 7 48291052 48291927 Vra5g0096 5 784953 786169 PCT