Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2767 ATGGGTGCCCTTTTGAATCTGCTTCCACTTTTCATAGTCTTGGTTTTGTTTAACGTTTCAACCTCAGATTATCTCCCTGCAAATTTTGTATTCGGAGATTCCCTTGTTGACGCAGGAAACAATAACTACCTTGTTTCCTTCTCAAAGGCTAATTATGTACCCAATGGCATTGATTTTGGAAGACCAACGGGAAGGTTCACTAATGGAAGAACCATCGTCGACATCATTGGTCAGGAACTGGGTATGGATTTAACCCCACCTTATTTGGCACCCACCACAGTTGGACCAGTAATTCTGAAAGGTGTCAATTATGCTTCTGGTGGAGGTGGAATTCTCAATTTCACTGGACAAATCTTTGGTGGTCGGCTCAACTTCGATGCGCAGATAGATAATTTTGCAAATACCAGACAAGACATCATAGCCAGCATTGGTGTTCCTGCGGCTCTTAATCTATTAAATAGGTCATTGTTTTCCGTGTCGATAGGCTCAAACGATTTCATAAATAACTACCTAACACCATCATTCTCATTTTCCGAACGGGAGTCGGAGTCTCCACAATCCTTTGTCGCAAAAATGATATCAAAATTCAGACTTCAGCTCACTAGGTTGTTCAATCTGGGGGCTAGAAAAGTTGTTGTGGCGAATGTGGGGCCTATAGGGTGTATACCAAGTCAGAGGGATTCAAACATCGGTGCTGGAGATAGCTGTGTTTCTTTCCCCAATCAGCTAGCACAGCTATATAATTCCCAACTAAAGGACCTTATTACAGAACTCAACTCAAATCTAGAGGGTTCAGCTTTTGCTTATGCAGATGTGTATCAAATTTTAGATGATATGCTCAAGAATTATGTAGCACTCGGTTTTGTTAATCCAACTTCAGCTTGTTGTCGCGTGGCTGGGCGCTATGGAGGTCTGGTTCCATGTGGTCCCACATCGAAAGTTTGCTGGGACAGATCAACTTACGTGTTTTGGGACCCCTATCATCCAACTGATGCTGCAAATGTTATCGTCGCTGAGAATCTCTTAGAAGGAGGTTCCAACTACATTTGGCCACGCAACATTCGCGGACTCCTTCAAACTTGA 1083 0.4303 MGALLNLLPLFIVLVLFNVSTSDYLPANFVFGDSLVDAGNNNYLVSFSKANYVPNGIDFGRPTGRFTNGRTIVDIIGQELGMDLTPPYLAPTTVGPVILKGVNYASGGGGILNFTGQIFGGRLNFDAQIDNFANTRQDIIASIGVPAALNLLNRSLFSVSIGSNDFINNYLTPSFSFSERESESPQSFVAKMISKFRLQLTRLFNLGARKVVVANVGPIGCIPSQRDSNIGAGDSCVSFPNQLAQLYNSQLKDLITELNSNLEGSAFAYADVYQILDDMLKNYVALGFVNPTSACCRVAGRYGGLVPCGPTSKVCWDRSTYVFWDPYHPTDAANVIVAENLLEGGSNYIWPRNIRGLLQT* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2767 360 SUPERFAMILY SGNH hydrolase 31 342 - -
Vra7g2767 360 Pfam GDSL-like Lipase/Acylhydrolase 29 340 IPR001087 GO:0016788
Vra7g2767 360 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE SUPERFAMILY PROTEIN 12 359 - -
Vra7g2767 360 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE-RELATED 12 359 - -
Vra7g2767 360 CDD SGNH_plant_lipase_like 26 344 IPR035669 -
Vra7g2767 360 Gene3D SGNH hydrolase 17 345 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2767 Vra-Chr7 47933130 47935087 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2767 24 360 Acyl Lipid Metabolism Gene Families AT4G10950 37.243 3.17e-72 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2767 - - gmx:100809250 587.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2767 7 47933130 47935087 Vra7g2767 7 47933130 47935087 ECH
Vra7g2767 7 47933130 47935087 Vra10g0769 10 13731267 13733033 PCT