Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0769 ATGGGTATCAAGTTGAATGGACCAGTCTCTGCTGTTGCCATTTTGTTTGAAGTTTTTGTAGTCTTATCCTTGTTTAGGATTACGACTTCAGATGCACAACCAGCAAATTTTGTCTTCGGAGATTCTCTTGTCGATGTAGGGAACAACAATTACATTGCTTCCCTCTCAAAAGCTAATTATCCTCCCTTTGGAATTGACTTTGGAAGACCAACAGGGAGGTTCACAAATGGAAGAACCATAGTTGACATCATTGGTCAAGAAATGGGTGCTGATTTCACCCCACCTTACTTAGCACCAACAGCAGTATTACCTCTGATTATGAAAGGTGTCAACTATGCTTCTGGTGCAGGTGGAATCCTCAATCTCACTGGAAAACTCTTTGGTGACAGAATCAACTTCGATGCACAGTTAGATAACTTTGCCAACACCAGGCAAGACATAATTTCTAGCATTGGAGTTCCTGCAACTCTCAGTCTATTCAATAGGTCCATATTTTCAGTAACAATGGGTTCCAACGATTTCATCAACAACTATTTAGCACCAGCAGTCCTAATTGACGAGATAAATTTGGCATCTCCAGACCTCTTTGTGACCACCTTAGTGTCAAAGTTCAGAGAACAGCTCACTAGGCTATACAATCTAGGTGCCAGAAAAATTGTCGTGACAAATGTAGGACCTATTGGATGTATACCAAGTCAGAGGGATACAAACCCAGCTGCGGGTGATGGGTGTGTCAGTTTTCCCAATCAGCTAGCACAGTTATTCAATATCCAGTTGAAGGGTCTTATTCCAGAGCTGAATTCAAATCTGAAGGGTTCAATGTTCGTTTATGCAGATGTGTACAACATATTAGAAGACATGCTCAACAATTACCCAGCATATGGTTTTGAGAATGCATGTACATCTTGTTGTTCCATGGCAGGGCGTTTTGGAGGTTTGATTCCGTGTGGTCCCACTTCGAGCATTTGCAGGAACAGATCCAAGTATGTTTTCTGGGACCCTTGGCATCCCACTGATGCTGCAAATGCTATCATCGCAAAGCGCCTCTTAGATGGTGATTCTAATGACATTTTTCCAATGAATGTTCGCCAACTCATCCAACATTTGACCTGA 1113 0.4205 MGIKLNGPVSAVAILFEVFVVLSLFRITTSDAQPANFVFGDSLVDVGNNNYIASLSKANYPPFGIDFGRPTGRFTNGRTIVDIIGQEMGADFTPPYLAPTAVLPLIMKGVNYASGAGGILNLTGKLFGDRINFDAQLDNFANTRQDIISSIGVPATLSLFNRSIFSVTMGSNDFINNYLAPAVLIDEINLASPDLFVTTLVSKFREQLTRLYNLGARKIVVTNVGPIGCIPSQRDTNPAAGDGCVSFPNQLAQLFNIQLKGLIPELNSNLKGSMFVYADVYNILEDMLNNYPAYGFENACTSCCSMAGRFGGLIPCGPTSSICRNRSKYVFWDPWHPTDAANAIIAKRLLDGDSNDIFPMNVRQLIQHLT* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0769 370 CDD SGNH_plant_lipase_like 34 353 IPR035669 -
Vra10g0769 370 Pfam GDSL-like Lipase/Acylhydrolase 37 348 IPR001087 GO:0016788
Vra10g0769 370 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE-RELATED 21 367 - -
Vra10g0769 370 SUPERFAMILY SGNH hydrolase 157 351 - -
Vra10g0769 370 Gene3D SGNH hydrolase 26 352 IPR036514 -
Vra10g0769 370 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE SUPERFAMILY PROTEIN 21 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0769 Vra-Chr10 13731267 13733033 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0769 34 367 Acyl Lipid Metabolism Gene Families AT4G10950 36.499 1.81e-73 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0769 - - gmx:100813870 649.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra10g0769 10 13731267 13733033 Vra10g0769 10 13731267 13733033 ECH
Vra7g2767 7 47933130 47935087 Vra10g0769 10 13731267 13733033 PCT