Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2753 ATGAGGAGGAGCTTACCCTCTGCGTCCTTTTTTCTGGTCCATGTTCTTCTTCTATTCTGTATTCTTCTCACACCAACTCATTCCTCTGACGGAGATGGTGACGATGATGGTGATTTGGTTGACCAGATATGCCGAAAGACTCCCTTTTATGATCTCTGCAGCTCCATCTTACACTCAAATCCCTTGGCCCCCAAAAGTGATCCAAAGGGTATGGCCCTCATAATGGTGAATGACATTCAGGCAAATGCTACTGACACACTGAGTTACATTGAAGAGTTGATCAAGCAAACCTCGGATGAACAATTGGAGCAACAACTGGCTTTCTGCGCAGAGTCATACATCCCAGTTGTGAAGTACATTCTCCCACAAGCAGCTGATGCCATAAGCCAAGGTCGATTTGGGTTTGCCAGTTACTGCATAGTTGATGCTCAGAAGGAAGTAAATGCCTGCGACAAGAAATTTTCTGGCTCATCTCAGGCACCCTTAAGTGATAGAAATGACATTATGCAGAAGNTGGTGGATGTGGCTGCAGCCATAGTTAAACTACTATTAAATGGTTGA 561 0.4456 MRRSLPSASFFLVHVLLLFCILLTPTHSSDGDGDDDGDLVDQICRKTPFYDLCSSILHSNPLAPKSDPKGMALIMVNDIQANATDTLSYIEELIKQTSDEQLEQQLAFCAESYIPVVKYILPQAADAISQGRFGFASYCIVDAQKEVNACDKKFSGSSQAPLSDRNDIMQKXVDVAAAIVKLLLNG* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2753 186 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 183 IPR035513 -
Vra7g2753 186 SMART PMEI_2 35 179 IPR006501 GO:0004857
Vra7g2753 186 TIGRFAM PME_inhib: pectinesterase inhibitor domain 14 183 IPR006501 GO:0004857
Vra7g2753 186 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 186 - -
Vra7g2753 186 Pfam Plant invertase/pectin methylesterase inhibitor 38 179 IPR006501 GO:0004857
Vra7g2753 186 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 10 186 - -
Vra7g2753 186 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 184 IPR035513 -
Vra7g2753 186 CDD CIF_like 39 183 IPR034087 GO:0004857|GO:0043086
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2753 Vra-Chr7 47776652 47779079 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2753 - - gmx:100788167 313.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2753 7 47776652 47779079 Vra7g2753 7 47776652 47779079 ECH
Vra7g2753 7 47776652 47779079 Vra10g0755 10 13617262 13619406 PCT