Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0755 ATGAAGAGGATCCCAAGTTGTGTGTCTTCTTTTGCAATTCAAATTATTCTTGTAGCTTCTATTTCTGTTCCCTTCACACTATCCCAACCATCTTTCCATGGGGATGGTGACTTGGTAGACCAAATATGCAGAAAAACACCCTTTTACGACCTCTGCAGCTCCATCCTCCACTCAAACCCACTCAGTCCAAAACCTGATCTCAAAGCGGTGGCCCTCTTCATGGTGAACAACATTCTGGCAAATGCAACTGATACACTGAGTTACATCGAGGGCCTCATCAAGCAGACCCGAGACCGTGAGTTGGAGCAAGCCTTGGCCTTCTGTGCCGAGTCATATATCCCTCTTATCAAATACATTCTCCCACAAGCTGCTGATGCTATAAGCCAAGGCCGTTTTGGCTTTGCCAGTTACTGCATTTCTGATGCTCTCAAAGAAGTGAGTACCTGCGACAAGAAATTCTCTGCCACAACTCAAGCTCCCTTGGGGGACAGAAACGACATTGTGCAGAAGCTTGTGGATGTAGCCTCCGCTATAATCAAACTTCTGCTAAAGGGCTGA 558 0.4659 MKRIPSCVSSFAIQIILVASISVPFTLSQPSFHGDGDLVDQICRKTPFYDLCSSILHSNPLSPKPDLKAVALFMVNNILANATDTLSYIEGLIKQTRDRELEQALAFCAESYIPLIKYILPQAADAISQGRFGFASYCISDALKEVSTCDKKFSATTQAPLGDRNDIVQKLVDVASAIIKLLLKG* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0755 185 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 36 182 IPR035513 -
Vra10g0755 185 Pfam Plant invertase/pectin methylesterase inhibitor 37 178 IPR006501 GO:0004857
Vra10g0755 185 CDD CIF_like 37 182 IPR034087 GO:0004857|GO:0043086
Vra10g0755 185 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 183 IPR035513 -
Vra10g0755 185 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 25 185 - -
Vra10g0755 185 PANTHER PECTINESTERASE INHIBITOR-LIKE 25 185 - -
Vra10g0755 185 SMART PMEI_2 34 178 IPR006501 GO:0004857
Vra10g0755 185 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 182 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0755 Vra-Chr10 13617262 13619406 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0755 - - vra:106775570 363.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra10g0755 10 13617262 13619406 Vra10g0755 10 13617262 13619406 ECH
Vra7g2753 7 47776652 47779079 Vra10g0755 10 13617262 13619406 PCT