Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2743 ATGGTGTTGGCTGCCCGAAACCCAATGAAGAGCGAAGGGATTCTCCCTCGTGAGGTTCCCGTGGTGGACTTCTCAGGCGAGAGAGCGGAAGTGGCGAAGGTGATCGTGAAAGCGTGCGAAGAATACGGTTTCTTCAAAGTGATAAACCACGGTATCAGCAAGGAAGTTATAGCGAAAACTGAAGAAGCAGGTTTCGGTTTCTTTGGAAAACCGATGCTGGAAAAGAAAGTGGCGGCACCTGCATATGGGTGCAAGAACATAGGTGTCAATGGAGACATGGGTGAGGTCGAGTACCTTCTCCTGAGTGCCACCACTGACTCCATTGCTCACATTTCCAAAACCATATCAACTGACCCATTAAATCTCAGGAAAAGCTTGAGTGCATACACAGAAGCAGTGAAAGAACTAGCATGTGAGATATTGGAGGTGATGGCAGAGGGGCTGGGGGTCCCGGACACTTGGGTTTTCAGCAGATTGATAAGGGATGGTGAAAGTGACTCAGTGCTGAGACTCAATCACTACCCACCTATAATTAACAGAGATAAGGACAAGTCATCACAAATTACCAAGGTTGGGTTTGGGGAGCATTCTGACCCTCAGATCCTCACCATACTCCGATCCAACGACGTCGGAGGCCTCCAAATTTCTCTTCCAGATGGGGTATGGATCCCAGTCACACCTGACCCCTCTGCATTCTATGTCAACGTCGGTGATGTACTACAGGTTATGACAAATGGAAGATTTGTGAGCGTGAGACACAGGGCAATGACGAACTCATACAAGTGTAGAATGTCAGTGGCATATTTTGGGGCTCCACCTCTGCATCAAACCATTGTTGCTCCCTCAGTTATGGTGACACCTCAGAGGCCCTCTCTCTTCCGACCATTCACTTGGGCCGAATACAAGAAAGCCACATATTCTCTCAGGCTTGGAGACACACGCCTTCAGCTTTTCAGAAACTGCAAACGCTGA 972 0.4866 MVLAARNPMKSEGILPREVPVVDFSGERAEVAKVIVKACEEYGFFKVINHGISKEVIAKTEEAGFGFFGKPMLEKKVAAPAYGCKNIGVNGDMGEVEYLLLSATTDSIAHISKTISTDPLNLRKSLSAYTEAVKELACEILEVMAEGLGVPDTWVFSRLIRDGESDSVLRLNHYPPIINRDKDKSSQITKVGFGEHSDPQILTILRSNDVGGLQISLPDGVWIPVTPDPSAFYVNVGDVLQVMTNGRFVSVRHRAMTNSYKCRMSVAYFGAPPLHQTIVAPSVMVTPQRPSLFRPFTWAEYKKATYSLRLGDTRLQLFRNCKR* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2743 323 Gene3D - 4 309 IPR027443 -
Vra7g2743 323 Pfam non-haem dioxygenase in morphine synthesis N-terminal 19 78 IPR026992 -
Vra7g2743 323 SUPERFAMILY Clavaminate synthase-like 16 312 - -
Vra7g2743 323 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 5 320 - -
Vra7g2743 323 Pfam 2OG-Fe(II) oxygenase superfamily 166 270 IPR044861 -
Vra7g2743 323 PANTHER PLANT GIBBERELLIN 2-OXIDASE 5 320 - -
Vra7g2743 323 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 164 272 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2743 Vra-Chr7 47725280 47727942 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2743 8 319 Glycosyltransferase AT5G59530 29.129 5.23e-31 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2743 K04125 - gmx:100816206 548.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2743 7 47725280 47727942 Vra7g2743 7 47725280 47727942 ECH
Vra7g2743 7 47725280 47727942 Vra10g0744 10 13531038 13536153 PCT