Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2671 ATGTTTAGATTAAAGAACTGTGAAGGCCCTGTGCGGTTCTTGTATCAGCAAGCTCGGCATCACCCTCACCATAACAATCTCATGGCTTATTTAGTAGGTTTCGATCCTTGCTCCCACTTGAGCAGGGCCTTTTCGCAGTACCCTTCTATCTCTTCTTCTGATCGTGGCTGCTATCTGTCTTTCCCACTTCTCCATAAACTTGTTTATGCAAATGTTTTTGGGGTTAGAAGAAGCATTGGTTTTGGTCGTAGAGGTTGTGGCTTTGATAGTAGTGGTAGTTGTAGTGGTAATGGTGATAGGATCTTTGTGAGGGCTAAGGCAAGGTCCCGTGGCTTTGCATCGAATCGTCGCCAGCCGATGTTGGCTGATTTGGAGAAAAGGAATTCTGTTAAGAGTGATGAATCTGATGCTACTTTGGTTAAGATTGATGACGGATCTATAAATGGAAGTCCTGCTAAACCTCCTTGTTTCAATGATCACCGATTGTCCCAGAAACTTGTTGTTGCCGTTGATGTTGATGAGGTATTAGGAAACTTCGTTTCAGCTCTCAACAAGTTCATTGCAGATCGATATTCATCAAATTATTCAGTTTCCGAATATCATGTGTACGAGTTTTGTAAGATATGGAATTGTTCACGTGATGAAGCTGACATCCGTGTACATGAATTTTTTAAGACACCATATTTCAAGTCAGGGATCCACCCTCTTCCAGGTGCTCATACGGCTCTTCAGAAGTTATCAAGATTTTGTAGCCTATCAGTTGTAACTTCACGGCAGAATGCAATTAAGGATCACACAATCGAGTGGATAGAGAAGAATTTTCCTGGACTGTTCCATGAGATTCACTTTGGTAACCACTTTGCTCTTGATGGCGTGTCAAGACCAAAGTCAGAAATTTGTAGGTCCTTAAATGCCAAGGTTCTTATCGATGATAACCCTCGATATGCCATAGAGTGTGCTAATGTTGGAATTAGAGTCCTGCTTTTTGATTATGAAAATTCATATCCTTGGTGCAAGAGCGAGTCTACGGAAGAACACCCTCTGGTGACCAAAGTAAAGAATTGGGAAGAAGTCGAACAACAATTAATGTCATTGATTGCCTCTTAG 1107 0.4164 MFRLKNCEGPVRFLYQQARHHPHHNNLMAYLVGFDPCSHLSRAFSQYPSISSSDRGCYLSFPLLHKLVYANVFGVRRSIGFGRRGCGFDSSGSCSGNGDRIFVRAKARSRGFASNRRQPMLADLEKRNSVKSDESDATLVKIDDGSINGSPAKPPCFNDHRLSQKLVVAVDVDEVLGNFVSALNKFIADRYSSNYSVSEYHVYEFCKIWNCSRDEADIRVHEFFKTPYFKSGIHPLPGAHTALQKLSRFCSLSVVTSRQNAIKDHTIEWIEKNFPGLFHEIHFGNHFALDGVSRPKSEICRSLNAKVLIDDNPRYAIECANVGIRVLLFDYENSYPWCKSESTEEHPLVTKVKNWEEVEQQLMSLIAS* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2671 368 PANTHER NUCLEOTIDASE YQFW-RELATED 77 367 - -
Vra7g2671 368 SUPERFAMILY HAD-like 159 363 IPR036412 -
Vra7g2671 368 Pfam 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) 166 362 IPR010708 GO:0008253|GO:0009264
Vra7g2671 368 Gene3D - 203 365 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2671 Vra-Chr7 46974373 46978537 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2671 - - gmx:100793947 670.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2671 7 46974373 46978537 Vra7g2671 7 46974373 46978537 ECH
Vra7g2671 7 46974373 46978537 Vra5g0211 5 1791579 1795368 PCT