Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0211 ATGGCTCGTATGTTAGGCTATGAACCTTGTTCCCATTCATCTAGGGCCTTTTTCAATTACCCTTCTATTTCTTCCCCTGAGGCTAACAGAAGACTTGGATTCACTTTTAGAGCTTGTTCTGATGCCAATGCTGGTGATAATTCTAAGAGGGTTTTCGTGAAGGAAAAGAATAAGCTTTATGGTTTTGCATGTCTTCCTCACCCACCCTTGTTAGGTAATTTTGAGGAAGGTATTTCTGTTGAAGATAGGTCTTTGGGTGGAAGTTCCTCCAAACCTTTTTGTTTCCCTGATCAACCCTTACTCCAGAAACTTGTTGTTGCTGTTGATGTTGATGAAGTATTAGGGAACTTTGTGTCAGCTCTGAACGAGTTCATAGCAGATCGATACTCATCAAGTCATTCAGTTTCTGAGTATCATGTGTACGAGTTCTTCAAGATATGGAACTGTTCACGTGACGAAGCGAATACTCGTGTTCATGAATTTTTTGAGACATCATATTTCAAGTCAGGGATCCAACCTATCCCAGGTGCTCAGGTGGCCTTGCGGAAGTTATCAAGATTTTGTAACCTATCAGTTGTAACATCTCGGCAAAATGTGATCAAGGATCACACAATTGAGTGGATAGAAAAGCATTTTTCAGGACTGTTTCAGGATATTCACTTTGGAAACCACTTTGCTCTTGATGGGGTGTCCAGACCAAAGTCAGATATTTGTAGGTCTTTAAATGCAAATATTCTCATTGATGATAATCCAAGATATGCCATAGAGTGTGCTGAAGCCGGAATTAAAGTCCTACTCTTTGATTATGAAAACTCATACCCTTGGTCCAAGACTGATTCTGCTGATCAGCATCCCCTGGTGACCAAAGTTAAGAACTGGGATGAAGTTGAACAGCAACTAATGTCATTGGTAGCTTTATAG 921 0.4039 MARMLGYEPCSHSSRAFFNYPSISSPEANRRLGFTFRACSDANAGDNSKRVFVKEKNKLYGFACLPHPPLLGNFEEGISVEDRSLGGSSSKPFCFPDQPLLQKLVVAVDVDEVLGNFVSALNEFIADRYSSSHSVSEYHVYEFFKIWNCSRDEANTRVHEFFETSYFKSGIQPIPGAQVALRKLSRFCNLSVVTSRQNVIKDHTIEWIEKHFSGLFQDIHFGNHFALDGVSRPKSDICRSLNANILIDDNPRYAIECAEAGIKVLLFDYENSYPWSKTDSADQHPLVTKVKNWDEVEQQLMSLVAL* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0211 306 Gene3D - 153 303 IPR023214 -
Vra5g0211 306 SUPERFAMILY HAD-like 105 300 IPR036412 -
Vra5g0211 306 PANTHER NUCLEOTIDASE YQFW-RELATED 27 304 - -
Vra5g0211 306 Pfam 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) 104 300 IPR010708 GO:0008253|GO:0009264
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0211 Vra-Chr5 1791579 1795368 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0211 - - gmx:100810501 534.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0211 5 1791579 1795368 Vra5g0211 5 1791579 1795368 ECH
Vra7g2671 7 46974373 46978537 Vra5g0211 5 1791579 1795368 PCT