Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2659 ATGGCATCGTCAGAGAATGAACAGCCTTGTCACTCTCCTGTCTCTGATCAAACCCGTCCTCCTCCTCCTTTCAATGTCTGTATACAGAAATTTAGGCTATATGAGACTCGATCGAACTTTTACATGATAGGAAGGGACAAGACCAGGACATATTGGAGAGTACTAAAGATTGACCGTCTAGATCCTTCTGAACTAAACTTGCGTGAAGATTCCACCACATATACAGAAAGTGAATGTTCTGATCTTTTGAGACGGATACACGAGGGTAACAAGTCAACAGGTGGACTTAAATTTGTTACAACTTGTTATGGAATTGTAGGGTTCATAAAATTTTTGGGACCTTACTACATGGTGCTTATCACAAAAAGAAGGCAAATTGGTGCAATCTGTGGTCATACAGTGTATGCTGTCTCTAAGAGTGAGATGATTCCATTGCCATATTCTTCAGTTGGGTCTAACATCAATGATAAAAATGAAAACAGGTACAAGAGGCTCTTATGCATGGTCGACCTTACAAAGGACTTCTTTTTCAGCTACTCATATCACATCATGCGTAGTCTTCAGAGGAACATGTGTGATAATGAGACAGGCCATGTTCTTTATGAGACCATGTTTGTTTGGAATGAGTTCTTAACAAGGGGAATTAGAAATCACCTCAAAAATACTATTTGGACAGTCGCACTAGTTTATGGCTTTTTTAAACAGGATACACTCATGATATCCGGACGGGAGTTTATACTTACACTCATTGCAAGACGATCACGTCATTATGCTGGCACTAGGTACTTGAGGCGAGGTGTTAATGAGAAAGGCAGAGTAGCAAATGATGTCGAGACAGAACAAATGGTTTTTGAGGATGTTCCAGAAGGCTTTCCCATCCAAATAAGCTCTATCATCCAGAACCGCGGTTCAATTCCCCTTTTCTGGTCACAGGAAACTTCAAAACTAAATATTAAACCAGATATTATATTGTCAAAGAGGGATCAGAATTATCAAGCCACTAGACTTCACTTTGAAAACCTCGTCAAAAGATATGGGAATCCCATTATTATTTTGAATTTGATTAAGACCCATGAGAAGAAGCCTCGTGAGTCCATACTTCGGGCAGAGTTTGCTAATGCAATAGATATTATTAATAAGGATTTATCCGAGGAGAACAGGCTTAGGTTTCTTCATTGGGATCTGCACAAACATTTTCAGAGCAAAGCTACAAATGTCTTGCAGCTTCTGGCCAAAGTGGCTGCATATGCATTGACATTAACAGGTTTTTTCTATTGCCAAGCAACACCGACATTGAGACTAGAAGAATCTCTAAATTTGCCAACTACAGACAATGTTAAGGCAACCTATTCACCTACTAGACTTGTCAATGATGACAACGAGGATGCTAACAACTTAGAAAGGAAACCAATTGAAGAAAACCATGATGTCATTGAAACTCATTCTACCAAACCTCCCAAGTTGCAGACGGGAGTTCTCAGGACCAACTGCATTGACTGTTTGGATCGCACAAATGTTGCACAATATGCATATGGGTTGGCTGCTCTTGGACACCAGCTCCATGCTGTGGGAGTTATTGACCACCCAAAAATTGATCTTGATGATCCTGTAGCTGATGATTTAATGGGTTTTTATGAGCGGATGGGTGATACTCTTGCTCATCAGTATGGTGGTTCAGCAGCGCACAATAAGATTTTCTCTGAGAGGAGGGGTCAGTGGAGAGCTGCAACACAGTCTCAAGAGTTTTTTAGGACTCTTCAACGCTATTACAGCAATGCATACATGGATGCTATGAAACAGAATGCAATTAATGTATTTCTGGGGCATTTTCAGCCCCAACAGGGTAAGCCTGCTCTATGGGAGTTGGATTCAGATCAACTCTATGATACAGCAAGACCTGGAGAGGATGATTCAAGGTCATTTTTTAAAAGATCCTTCTCAGATGGGAACATTCTTAATGAAAGTTCCACACCAATGTCAGCCCCAAATGCCAGCAACGTAAAATTCCAAAGCCAATACTTGTCAGATCGATTAGAAGATGGAGGCAAGGATCTTTGTGAATCATCACCCGAAATATCTAGTGCTGAGAATGACATCTCGTTTTCAAGGTACACTCCCACAATGCCTCGGAGACATCTCTTTGGGGATATGCAAAGAGAGCGTTGCGTTGAAAGTGATCATATTTGCTATTCTGATCACGGAGATTCCTTCAGCTGCTCCAACTTTGTTGATCTGGATTGGTTGTCTTCTTCAGCAAATTCATGTGAAGAGGAGCCATTTGAGAGATCATCAATCACTAACTCTCCAATTGCTGGAGTTTCTTCTGAAAACGTTGTCAATGGAATAATGGTAGGAGCAGCAACTGCCTCCACGAGTGATTGGGGGGCCTCCAGCCTAAAGGGAAGAGGGCGAACTGAATCTGAGTTACCGTATGGTAATTCACAATCCAACACTGGAGAGGAATTTCCAGATACTTTTGTACAATGGGTGACTTATGGACAAACACTTTGCCATTGA 2517 0.4124 MASSENEQPCHSPVSDQTRPPPPFNVCIQKFRLYETRSNFYMIGRDKTRTYWRVLKIDRLDPSELNLREDSTTYTESECSDLLRRIHEGNKSTGGLKFVTTCYGIVGFIKFLGPYYMVLITKRRQIGAICGHTVYAVSKSEMIPLPYSSVGSNINDKNENRYKRLLCMVDLTKDFFFSYSYHIMRSLQRNMCDNETGHVLYETMFVWNEFLTRGIRNHLKNTIWTVALVYGFFKQDTLMISGREFILTLIARRSRHYAGTRYLRRGVNEKGRVANDVETEQMVFEDVPEGFPIQISSIIQNRGSIPLFWSQETSKLNIKPDIILSKRDQNYQATRLHFENLVKRYGNPIIILNLIKTHEKKPRESILRAEFANAIDIINKDLSEENRLRFLHWDLHKHFQSKATNVLQLLAKVAAYALTLTGFFYCQATPTLRLEESLNLPTTDNVKATYSPTRLVNDDNEDANNLERKPIEENHDVIETHSTKPPKLQTGVLRTNCIDCLDRTNVAQYAYGLAALGHQLHAVGVIDHPKIDLDDPVADDLMGFYERMGDTLAHQYGGSAAHNKIFSERRGQWRAATQSQEFFRTLQRYYSNAYMDAMKQNAINVFLGHFQPQQGKPALWELDSDQLYDTARPGEDDSRSFFKRSFSDGNILNESSTPMSAPNASNVKFQSQYLSDRLEDGGKDLCESSPEISSAENDISFSRYTPTMPRRHLFGDMQRERCVESDHICYSDHGDSFSCSNFVDLDWLSSSANSCEEEPFERSSITNSPIAGVSSENVVNGIMVGAATASTSDWGASSLKGRGRTESELPYGNSQSNTGEEFPDTFVQWVTYGQTLCH* 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2659 838 Pfam SacI homology domain 103 399 IPR002013 GO:0016791
Vra7g2659 838 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC3-RELATED 18 838 - -
Vra7g2659 838 MobiDBLite consensus disorder prediction 794 820 - -
Vra7g2659 838 MobiDBLite consensus disorder prediction 1 23 - -
Vra7g2659 838 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 18 838 IPR043573 GO:0043813|GO:0046856
Vra7g2659 838 ProSiteProfiles Sac phosphatase domain profile. 166 558 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2659 Vra-Chr7 46855380 46865764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2659 27 838 Acyl Lipid Metabolism Gene Families AT5G20840 62.683 0.0 1019
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2659 K22913 - gmx:100810079 1505.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2659 7 46855380 46865764 Vra7g2659 7 46855380 46865764 ECH
Vra7g2659 7 46855380 46865764 Vra5g0226 5 1970140 1984218 PCT