Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2656 ATGGCTACCGATCGTTTGACCCGTGTTCACAGTCTCCGTGAGAGGCTTGATGAAACCCTGTCTGCCAACAGGAACGAAATTCTGGCCCTTTTGTCAAGGATCGAAGGCAAGGGCAAGGGGATTTTGCAACACCATCAGGTCATCGCCGAGTTTGAGGAAATCCCCGAGGAGAGCAGACAGAAGCTTACTGATGGTGCCTTTGGAGAAGTTTTGAGATCTACTCAGGAAGCCATAGTTTTGCCACCATGGGTTGCTCTGGCCGTTCGTCCAAGGCCTGGTGTGTGGGAGTACCTGAGAGTGAATGTGCACGCTCTAGTTGTTGAGGCGTTGCAACCTGCTGAGTACCTGCGCTTCAAGGAGGAACTTGTTGATGGAAGTTCTAATGGCAACTTTGTGCTTGAGTTGGACTTTGAACCCTTTACCGCATCCTTCCCCCGCCCAACTCTTAACAAGTCAATTGGAAATGGCGTGCAGTTCCTCAACCGTCACCTTTCTGCCAAACTCTTCCATGACAAGGAGAGCTTGCACCCGCTTTTGGAATTCCTCAGGCTTCACAGCGTCAAGGGAAAGACTTTGATGTTGAATGACAGAATTCAAAACCCGGATGCTCTTCAACATGTTCTGAGGAAAGCTGAGGAGTATCTGGGCACAGTGCCTCCTGAAACCCCATACTCAGCATTTGAGCACAAGTTCCAGGAGATTGGTTTGGAGAGAGGGTGGGGTGACAACGCAGAGCGTGTACTCGAGTCAATTCAACTTCTCTTGGATCTTCTTGAGGCCCCTGATCCGTGCACCCTTGAGACTTTCCTTGGAAGAATCCCTATGGTCTTTAATGTTGTTATTCTTTCTCCCCATGGTTACTTTGCCCAAGATAATGTCTTGGGATATCCTGACACTGGTGGTCAGGTTGTTTACATCTTGGATCAAGTTCGTGCTTTGGAGAATGAGATGCTCCATCGCATTAAACAACAAGGATTGGACATTGTTCCTCGTATTCTCATCATCACCCGTCTTCTCCCAGATGCAGTAGGTACTACTTGCGGCCAACGTCTTGAGAAGGTGTTTGGAACTGAACACTCTCACATTCTTCGAGTTCCCTTTAGAACTGAGAACGGAATTGTTCGCAAGTGGATCTCAAGATTCGAAGTCTGGCCCTACCTGGAAACTTACACCGAGGATGTTGCTCATGAGCTTGCAAAAGAGTTGCAAGGCAAGCCAGATCTGATCGTTGGAAACTACAGTGATGGAAACATCGTTGCCTCTTTGTTGGCACATAAATTAGGTGTCACTCAGTGTACCATTGCTCATGCACTTGAGAAGACCAAATACCCTGAATCCGATATTTACTGGAAAAAACTGGAAGAGAGATACCACTTCTCTTGCCAATTCACAGCCGATCTATTTGCCATGAACCACACAGATTTCATCATCACCAGTACATTCCAAGAGATTGCTGGAAGCAAGGACACTGTTGGACAGTATGAGTCTCACACAGCCTTCACCCTTCCTGGACTCTACCGTGTTGTGCACGGTATTGATGTCTTCGATCCAAAATTCAACATTGTCTCTCCCGGAGCTGATCAAACCATTTACTTCCCCCACACCGAAACTAGCCGCAGGTTGACCTCTTTCCACACCGAAATCGAAGAGCTTCTCTACAGTTCAGTCGAGAACGAAGAACACATATGTGTGCTGAAGGACCGCACGAAGCCAATTATTTTCACCATGGCAAGGCTGGACCGTGTGAAGAACATCACAGGACTAGTGGAGTGGTACGGTAAGAACGCGAAGCTGAGGGAGTTGGTGAACCTTGTGGTCGTTGCTGGAGACAGGAGGAAGGAGTCGAAGGACTTGGAAGAGAAGGCGGAGATGAAGAAGATGTATAGCCTGATCGAGACGTACAAGTTGAACGGGCAATTCAGATGGATTTCATCTCAGATGAACCGTGTGAGGAATGGAGAGCTGTACCGTGTGATCGCCGACACCAAGGGTGCGTTTGTGCAGCCTGCAGTGTACGAGGCATTTGGTTTGACAGTGGTTGAGGCCATGACTTGTGGGTTGCCAACATTTGCAACATGCAATGGTGGGCCTGCTGAGATCATCGTCCATGGAAAATCTGGGTTCCACATTGATCCTTACCACGGTGACCGTGCTGCTGACCTCCTTGTTGAGTTCTTTGAGAAGGTCAAGGTTGACCCATCTCACTGGGACAAGATCTCTCAAGCCGGTCTCCAACGTATTGAAGAGAAGTACACATGGCAAATTTACTCCCAGAGGCTTCTCACTCTCACGGGTGTGTATGGTTTCTGGAAGCATGTGTCTAACCTGGATCGCCGTGAGAGTCGGCGCTATCTTGAGATGTTCTATGCTCTCAAGTACCGCAAATTGGCGGAGTCTGTGCCCCTTGCTGTTGAGTAA 2418 0.4859 MATDRLTRVHSLRERLDETLSANRNEILALLSRIEGKGKGILQHHQVIAEFEEIPEESRQKLTDGAFGEVLRSTQEAIVLPPWVALAVRPRPGVWEYLRVNVHALVVEALQPAEYLRFKEELVDGSSNGNFVLELDFEPFTASFPRPTLNKSIGNGVQFLNRHLSAKLFHDKESLHPLLEFLRLHSVKGKTLMLNDRIQNPDALQHVLRKAEEYLGTVPPETPYSAFEHKFQEIGLERGWGDNAERVLESIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLHRIKQQGLDIVPRILIITRLLPDAVGTTCGQRLEKVFGTEHSHILRVPFRTENGIVRKWISRFEVWPYLETYTEDVAHELAKELQGKPDLIVGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPESDIYWKKLEERYHFSCQFTADLFAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADQTIYFPHTETSRRLTSFHTEIEELLYSSVENEEHICVLKDRTKPIIFTMARLDRVKNITGLVEWYGKNAKLRELVNLVVVAGDRRKESKDLEEKAEMKKMYSLIETYKLNGQFRWISSQMNRVRNGELYRVIADTKGAFVQPAVYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYHGDRAADLLVEFFEKVKVDPSHWDKISQAGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRRESRRYLEMFYALKYRKLAESVPLAVE* 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2656 805 Gene3D Glycogen Phosphorylase B; 280 796 - -
Vra7g2656 805 Pfam Glycosyl transferases group 1 564 728 IPR001296 GO:0016757
Vra7g2656 805 Gene3D - 25 145 - -
Vra7g2656 805 TIGRFAM sucr_synth: sucrose synthase 24 802 IPR012820 GO:0005985|GO:0016157
Vra7g2656 805 PANTHER SUCROSE SYNTHASE 1 805 - -
Vra7g2656 805 Gene3D - 146 275 - -
Vra7g2656 805 Gene3D Glycogen Phosphorylase B; 527 753 - -
Vra7g2656 805 Pfam Sucrose synthase 8 553 IPR000368 GO:0005985|GO:0016157
Vra7g2656 805 PANTHER - 1 805 IPR012820 GO:0005985|GO:0016157
Vra7g2656 805 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 295 763 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2656 Vra-Chr7 46814423 46819718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2656 6 805 Glycosyltransferase AT3G43190 84.625 0.0 1423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2656 K00695 - gmx:547508 1584.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2656 7 46814423 46819718 Vra7g2656 7 46814423 46819718 ECH
Vra7g2656 7 46814423 46819718 Vra5g0228 5 2005493 2011269 PCT