Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2619 ATGCTACCATTCAACCAAGCTACCCTAACTCCTAAACCCCTCAATCCCACTCCCTCACCCAACCACCACCAATCACCACCACATCCACCACCACCACCACCTTCCTCTTCTTCTTCCACTGCTCCAACCATGACCAACACCAATCCAATTCTAGATTCTAATCCTCCAAACCTCGAAGGAGATTCCGATTCTGATATTGACGCTCTCATCAATGCTTTTTTCGAACCTAATCCCCAATTCCACTCTCTCGATCACCTCCAAGGATCCACCTCCGATGCCAAGGAATCATCTCTCAAGAGGGGATTAGACACCGGGGGTGATTCTTCCCACGCACCAATTCTCCTCAAACGCGGTCGTATTGACAATGTCATCTTCCCTCGCGCTGATCTTCACGCCGCCTTTCAAATTCAAAACCCTACTCCTTCTCCTTTTCCTCTCTCTCAGCCTCTGCCGCATGCCGCCGCTACCAATGGAGACACTCAAGTTGTGGAAGGGCAGGGGAGGCGCCCGGTGTTTGACTCCGATTTTCTCTCCAGGGCTCTCCGTGAAGCTGAATCGGTCTTTCCGCAGAATTCAGGCGACAACGACGTTAACTTTGACGTGGAACCTGGAGATTTTAGTGCACCTTATCTATCGCTGAATGATTTTAGGAGGATTCGGAACATGGAGCGTTTCCGACAGATAGCGAAGGAAAGCGCCACTCACTATGCTCGATTCACGTCGGAGGAGACCGCAGATGAAAGGCCGTCGTCTTCTGCTGCGCCTCAGGGAATCGAAGATTCCACATCTCCGTTTTCGATCTCGATGAAGGCGATCAAAGAGGGAGCGGCGAAAAAGAAGGGGCGTGAGACGTGGGTTGCTAAGAGTCAAAAGGGGGAGAAGAGGGTCTGTGTTCCCTCCTTGCAAGAACTGTGTCTCAAAATTCTCGCGGACAATGCTGATGCCATGGTTTCCCTTGAGGGTGTACCGGATGAGTTGAGGCACAAGCTTTGCAAACTGCTCTGTGACTCGAGAAAAATGAATAGTCACTTTCTTGAACTTCTTCTCAGCGGGTCTCCGACGGAGATTCGCCTGAGAGATTGCTCGTGGTTGACGGTGGAACAGTTCGCCGAATGTTTTCGTTCGTGTGACACTGGAAGATTGGAGGTGCTGCAACTTGACCAGTGTGGAAGGTGTATACCTGATTATGCATTATTTGGTCCTCTGAGACAGTCACCATGGTGGTTGCCGAGACTAGTTAATCTGTCCCTCAGTGGTGCATGCCGTCTTTCAGACAAGGGGTTGCATGTGCTAGTTTCTTCTGCCCCATCACTAAGATCAATTAATTTGAGCCAGTGCTCCCTTCTCTCATCTGTCAGTGTCAATATTTTGGCGCATTCGTTGGGATCCCTACTGAAAGAGTTATATCTTGATGATTGCCTAACCATTGATGCTGCACAAATTGTGCCGGCATTGAAGAAACTCGAACATTTAGAAGTGTTGTCAATGGCTGGAATTCAAACTGTCTCTGATGAATTTATCGGGGATTACATCACTGCACGTGGTCACAACATGAAGGAGCTTGTTTTAAAGGACTGTAGAAAATTAACCAATGCATCAATAAAAGTCATCGCCGAGCACTGTCCCAAGTTGTGTGCACTCGATCTTATGTATTTGGACAACTTGACGGATTTATCCATGGGATATCTTACGAATAACTGTCGAGTACTCCATACATTGAAGCTCTGCCGTAATCCATTCAGTGATGAAGCAATTGCTGCATTTTTGGAGATTGCTGGAGGGTCCTTAACAGAACTTTCACTTAATAATATTAAGAAGGTTGGGCACCATACAGCCTTATCTCTTGCTAGTCATTCAAAAAATTTGCATACTCTAGATCTGTCTTGGTGCCGAAATTTGACAGACAATGAGTTGGGTTTGATTGTAGATAGCTGCTTCTCACTGAGGTTGCTTAAACTTTTCGGATGCTCACTGGTAACAGATGTTTTTCTCAATGGGCACTCAAACCCAGAGATTCAGATCCTAGGATTGAAGATGGCTCCTTTATTGCAAAATGTCAGAATGCCTGATACCTGTGAAGGTCCCTTGCGTTATTCACCAGTCTCGGTAGATTAG 2115 0.4709 MLPFNQATLTPKPLNPTPSPNHHQSPPHPPPPPPSSSSSTAPTMTNTNPILDSNPPNLEGDSDSDIDALINAFFEPNPQFHSLDHLQGSTSDAKESSLKRGLDTGGDSSHAPILLKRGRIDNVIFPRADLHAAFQIQNPTPSPFPLSQPLPHAAATNGDTQVVEGQGRRPVFDSDFLSRALREAESVFPQNSGDNDVNFDVEPGDFSAPYLSLNDFRRIRNMERFRQIAKESATHYARFTSEETADERPSSSAAPQGIEDSTSPFSISMKAIKEGAAKKKGRETWVAKSQKGEKRVCVPSLQELCLKILADNADAMVSLEGVPDELRHKLCKLLCDSRKMNSHFLELLLSGSPTEIRLRDCSWLTVEQFAECFRSCDTGRLEVLQLDQCGRCIPDYALFGPLRQSPWWLPRLVNLSLSGACRLSDKGLHVLVSSAPSLRSINLSQCSLLSSVSVNILAHSLGSLLKELYLDDCLTIDAAQIVPALKKLEHLEVLSMAGIQTVSDEFIGDYITARGHNMKELVLKDCRKLTNASIKVIAEHCPKLCALDLMYLDNLTDLSMGYLTNNCRVLHTLKLCRNPFSDEAIAAFLEIAGGSLTELSLNNIKKVGHHTALSLASHSKNLHTLDLSWCRNLTDNELGLIVDSCFSLRLLKLFGCSLVTDVFLNGHSNPEIQILGLKMAPLLQNVRMPDTCEGPLRYSPVSVD* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2619 704 MobiDBLite consensus disorder prediction 236 265 - -
Vra7g2619 704 PANTHER UNCHARACTERIZED 200 699 - -
Vra7g2619 704 PANTHER F-BOX/LRR PROTEIN 200 699 - -
Vra7g2619 704 SUPERFAMILY RNI-like 352 661 - -
Vra7g2619 704 MobiDBLite consensus disorder prediction 13 38 - -
Vra7g2619 704 MobiDBLite consensus disorder prediction 246 265 - -
Vra7g2619 704 Gene3D Ribonuclease Inhibitor 316 511 IPR032675 -
Vra7g2619 704 Gene3D Ribonuclease Inhibitor 591 688 IPR032675 -
Vra7g2619 704 Gene3D Ribonuclease Inhibitor 512 590 IPR032675 -
Vra7g2619 704 MobiDBLite consensus disorder prediction 80 107 - -
Vra7g2619 704 MobiDBLite consensus disorder prediction 1 64 - -
Vra7g2619 704 SMART LRR_CC_2 593 618 IPR006553 -
Vra7g2619 704 SMART LRR_CC_2 435 460 IPR006553 -
Vra7g2619 704 SMART LRR_CC_2 409 434 IPR006553 -
Vra7g2619 704 SMART LRR_CC_2 567 591 IPR006553 -
Vra7g2619 704 SMART LRR_CC_2 619 644 IPR006553 -
Vra7g2619 704 SMART LRR_CC_2 541 566 IPR006553 -
Vra7g2619 704 SMART LRR_CC_2 515 540 IPR006553 -
Vra7g2619 704 MobiDBLite consensus disorder prediction 39 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2619 Vra-Chr7 46439487 46443898 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2619 K15082 - gmx:100798274 867.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2619 7 46439487 46443898 Vra7g2619 7 46439487 46443898 ECH
Vra7g2619 7 46439487 46443898 Vra5g0262 5 2414330 2419661 PCT