Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0262 ATGGTTCAAACCAAAACCACTCTAAACCCCTCTAAACCCGACGCCATCCACCCACTCACGCCGGCAAAAACCCACGAACCTTCATCCGTTTCTACCTCTCCCCCTTTCCCCCGCCGCAGCCTCCGCCTCGCCTCTCTCTCCGACGCCTCCCCCGCCACTAGGGTTTCCGCCGCCTCCAACCGCCAGGCCTTTCTCAACTTAAGATCGGGAAAGAGGGTTCTCAAGAGAGCGATGACAAACGACTCAGATGAACAAGGTAATGACGCAAACGATGAAACTGATCACGTTGCAGTGGCGGTTGATGTCAATGTCACCGCGCCAGAAACTACAACGGAAAACTCAGCCGCCAATGTCAATGTTGTAGCAGATGATTCCGGTGTTAGGGTTTCCACCCGGAGCCGGAAGCGCAATAGTGACTCGACCGGTTTTGAACACGAGGAGTTTCTCTACTTAAGGTCGGGAAAGAAGGCTTTAAAGAGATCACTCAATTTCTATTCCAGAGAACAAGTTATTAACGCAGATGATGATGGTGCTGATAATGATGACGACGACGATGGTGATGTGGCAGTGGCGGTTGATGGTGACGTGACAACACCGGAATCTAGAACGGAGAACTCCGGTGTGAATAATGCACCTGCGCGAGTTCGAGAACGTTCTAGAAACTCCAATGCGAAGGAGCGTCGTTCCGGTTTGAGGAGGAACGATCATATGGAGCGCTTCCACGAAATTGCGCGGGAAAACGCGTCGCGGTTTGCTTTCTTCGCACCGGAAGAGGAAGATGGTGACCAGTTGCCGCCGGTTCCCGAAGCGGCGAGTGAGGAAATTGAGGACTGGCCCGGTCCTTTCTCTACGGCTATGAAAATCATCAGAGACCGAGGGATGAATCTTCAGAACGCTCAAACAAGTTCGCAGACGAACTTGTGTGAATCTATTAAGTGGGTTCCCAATGCGAAGAAAGGGGATTTGGGCATTTTATCGGTTCCTTCGTTGCAAGACATGTGCTTTAAGATTCTTGTGAAGAATGTTGACGCGATTGCATCGCTCGAGAGTGTGCCTGATGCGCTGAGGCACCGGCTTAGCCAGTTGCTCTGTGACTCAAGGAGAATTAACGGTCACTTTCTGGAGCTTCTTGTGCGTGGAACTCCCACGGAGATTCGGTTAAGGGACTGCTCGTGGTTGACTGAGGAACAGTTTACCGAGTGTTTTCGAATGTGTAACACGGAGAATTTGTTGGTACTGCAACTTGACCAGTGTGGGCGATGTTTGCCTGATTTTGTAGTAGTTGCGACTTTGGCACGGTCACCTAGGAATTTGGTTAGATTAACTACTCTATCACTCCGTGGTGCATGCCGACTTTCAGATGGAGGTTTACGTGCGCTCGTTTCTTCAGCTCCTGCTCTTAGATCGATAAATCTCAGCCAGTGCTCCCTTCTCACATCTGCTAGTATATATATTTTGGCTGAATCATTAAGACATCTTCTGAAAGAGTTGTTCCTTGATGATTGCCAATGCATTGATGCTGCACTAATTGTGCCAGCACTGATTGAGCTTGAACATTTAGAAGTGTTGTCAGTGGCTGGTATTCAAACTGTGTGTGATGAATTTGTCAAGAATTACATTGTTGCACGGGGCCAAAACATGAAAGAGCTTGTTTTGAAGGACTGTATAAACTTGACCGATTCATCAATCAAAGTTATTGTTGAGCATTGTCCGGGATTGCAGGTGCTTGATCTTACGAACCTGAACAGATTAACAGATTTATCCGTTGGATATCTTACCAATAGTTGCCGCTCACTTCATACCCTGAAGCTTTGCCGAAATCCATTCAGTGATGAAGCAATTGCTGCATTTGTGGAAACCACCGGAGGGACCCTGAAGGAACTGTCACTTAATAACATCAAGAAGGTTGGTTACCACACAACCTTATCACTTGCAAACCATGCAAAAAATTTGCACTCTCTAGATTTATCTTGGTGCAGAAATTTGACAGACAATGCACTAGGTTTGATTGTGGATAGCTGCTTGGCCCTGAGGTTACTCAAACTTTTTGGATGCACTCAGGTAACAGAAGCATTTCTTAATGGTCATTCAAACCTACAGATGCAGATAATTGGTTTAAAAATGTCTCCGGTTTTAGAACATGTCAAAGTTCCAGATCCTCATCAGGGTGCTTTGAATTATTCATCAGTCTCTTGGGATTTGGTATAA 2208 0.4697 MVQTKTTLNPSKPDAIHPLTPAKTHEPSSVSTSPPFPRRSLRLASLSDASPATRVSAASNRQAFLNLRSGKRVLKRAMTNDSDEQGNDANDETDHVAVAVDVNVTAPETTTENSAANVNVVADDSGVRVSTRSRKRNSDSTGFEHEEFLYLRSGKKALKRSLNFYSREQVINADDDGADNDDDDDGDVAVAVDGDVTTPESRTENSGVNNAPARVRERSRNSNAKERRSGLRRNDHMERFHEIARENASRFAFFAPEEEDGDQLPPVPEAASEEIEDWPGPFSTAMKIIRDRGMNLQNAQTSSQTNLCESIKWVPNAKKGDLGILSVPSLQDMCFKILVKNVDAIASLESVPDALRHRLSQLLCDSRRINGHFLELLVRGTPTEIRLRDCSWLTEEQFTECFRMCNTENLLVLQLDQCGRCLPDFVVVATLARSPRNLVRLTTLSLRGACRLSDGGLRALVSSAPALRSINLSQCSLLTSASIYILAESLRHLLKELFLDDCQCIDAALIVPALIELEHLEVLSVAGIQTVCDEFVKNYIVARGQNMKELVLKDCINLTDSSIKVIVEHCPGLQVLDLTNLNRLTDLSVGYLTNSCRSLHTLKLCRNPFSDEAIAAFVETTGGTLKELSLNNIKKVGYHTTLSLANHAKNLHSLDLSWCRNLTDNALGLIVDSCLALRLLKLFGCTQVTEAFLNGHSNLQMQIIGLKMSPVLEHVKVPDPHQGALNYSSVSWDLV* 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0262 735 MobiDBLite consensus disorder prediction 218 236 - -
Vra5g0262 735 Gene3D Ribonuclease Inhibitor 331 521 IPR032675 -
Vra5g0262 735 MobiDBLite consensus disorder prediction 198 217 - -
Vra5g0262 735 Gene3D Ribonuclease Inhibitor 532 642 IPR032675 -
Vra5g0262 735 Gene3D Ribonuclease Inhibitor 643 715 IPR032675 -
Vra5g0262 735 SMART LRR_CC_2 464 489 IPR006553 -
Vra5g0262 735 SMART LRR_CC_2 596 620 IPR006553 -
Vra5g0262 735 SMART LRR_CC_2 570 595 IPR006553 -
Vra5g0262 735 SMART LRR_CC_2 438 463 IPR006553 -
Vra5g0262 735 SMART LRR_CC_2 674 699 IPR006553 -
Vra5g0262 735 SMART LRR_CC_2 648 673 IPR006553 -
Vra5g0262 735 SMART LRR_CC_2 544 569 IPR006553 -
Vra5g0262 735 MobiDBLite consensus disorder prediction 24 38 - -
Vra5g0262 735 MobiDBLite consensus disorder prediction 1 39 - -
Vra5g0262 735 SUPERFAMILY RNI-like 385 690 - -
Vra5g0262 735 MobiDBLite consensus disorder prediction 175 190 - -
Vra5g0262 735 MobiDBLite consensus disorder prediction 173 236 - -
Vra5g0262 735 PANTHER UNCHARACTERIZED 193 729 - -
Vra5g0262 735 PANTHER F-BOX/LRR PROTEIN 193 729 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0262 Vra-Chr5 2414330 2419661 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0262 K15082 - gmx:100808150 979.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0262 5 2414330 2419661 Vra5g0262 5 2414330 2419661 ECH
Vra7g2619 7 46439487 46443898 Vra5g0262 5 2414330 2419661 PCT