Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2618 ATGGCGATATTCTCCGAATCGAATCACCATCACAACGCTTCCGATGGGGTGTCCCAGCGAGTCAACAGCCCGCGGTTCTCTGGCCCAATGACTCGCCGCGCCCACTCCTTCAAGCGCAACACTGACGGCGCCAACTCCAACGGCGGCTCCGGTGAGGTTGAGCTCCAAATCAATTCGCCCAGATCGGAAGAGCCGTCGGAGGGTGTTCCAGTGGGGAGGCACAGTCACAATCACGTGACCCAGAGAGTGCACGTCAGGGGGCTGCTGAAGAAGCCCCTTGCTTCCATCGTCGAGGATTTGGGGTTTAGGGAAAAGAAGAAAATTGGGCACTTGATGTTCTTGGCGTTCTGTGGGTTGTGCATCTTCATTGGTGTTCTCAAGATATGTGCCACTGGCTGGCTTGGATCTGCCATTGAAAGAGCTCAATCGGATAAGGAACTGCCTGACTCCATTCCTAGTCTAAATCTAATGGACAAAAGCTCCCTTGGTTATGCATATAGGGGGGAAGCAAGTGATGTTGAACGAACTTTAAAAACATTAGCAACGGGAGTAGGTGGCAGCCATACTGCCATGGCTGAAGATCCAGGGATCTGGTCTAAGCCCAACAGTGACAATTTCACCCAATGCATAGATCTTCCAAGTAATCGTAAAAAGCTAGATGCAAAGGTCAACGGCTACATTCTAGTAAATGCAAATGGTGGTCTGAATCAGATGAGATTTGGGATATGCGATATGGTTGCTGTTGCTAAGATTATGAAGGCAACGCTTGTTCTTCCTTCTCTTGACCACACCTCCTATTGGGCTGATGATAGTGGCTTCAAGGATTTGTTTGATTGGAAGTATTTTATTCATATGCTGAAGGATGATGTACACATAGTTGAGAAATTACCTCATGCTTATGCTGGAATTGAGCCTTTCCCAAAAACTCCAATATCTTGGTCCAAGGTTCCTTATTATAAGACTGAGGTTCTTCCCCTCCTAAAGCAGCACAAAGTGATCTATTTCACTCATACCGATTCCAGGCTTGCCAATAATGACATTCCACATTCCATACAGAAACTAAGATGCCGTGTAAATTACAGAGCACTGAAGTATTCAGCTCCAATTGAGGAATTTGGAAACACGCTAGTATCTAGGATGCAACAGAATGGAAGTTCGTATCTTGCCCTTCATTTGAGATATGAGAAGGATATGCTTGCATTTACAGGATGCAGTCATAATTTGACTGCAGAAGAAGATGAAGAACTGAGACAGATGCGATATGAAGTCAGTCACTGGAAGGAGAAGGAGATTAATGGGACTGAGAGGAGATTGCTAGGAGGTTGTCCATTAACTCCAAGGGAAACTTCCCTATTGCTTAAAGCATTGGGTTTTCCATCACACACCAGGATTTATCTAGTAGCTGGAGATGCATATGGAAGAGGGAGTATGAAATATCTTAAGGATGATTTCCCCAACATTTTCTCTCATTCCTCTCTGTCCTCTGAAGAAGAGTTGAATCCTTTCAAGAATCATCAGAACATGTTGGCCGGTATAGACTATGTTGTCGCCCTAAAGAGTGATGTTTTTCTTTACACTTATGATGGAAATATGGCAAAGGCGATACAAGGTCATAGGCGCTTTGAAAACTTCAAGAAGACCATCAATCCAGACAAGATGAATTTTGTTAATCTTGTTGATCAGTTGGATGAAGGAAAAATTTCATGGAAAAAGTTTAGCTCCAAGGTCAGAAAACTGCATGAAGACCGAATTGGTGCTCCATACCGAAGGGAACCTGGAGAATTTCCAAAGCTGGAGGAAAGTTTTTATGCAAATCCTCTGCCAGGATGTATTTGTGAAACAAGATAG 1848 0.4432 MAIFSESNHHHNASDGVSQRVNSPRFSGPMTRRAHSFKRNTDGANSNGGSGEVELQINSPRSEEPSEGVPVGRHSHNHVTQRVHVRGLLKKPLASIVEDLGFREKKKIGHLMFLAFCGLCIFIGVLKICATGWLGSAIERAQSDKELPDSIPSLNLMDKSSLGYAYRGEASDVERTLKTLATGVGGSHTAMAEDPGIWSKPNSDNFTQCIDLPSNRKKLDAKVNGYILVNANGGLNQMRFGICDMVAVAKIMKATLVLPSLDHTSYWADDSGFKDLFDWKYFIHMLKDDVHIVEKLPHAYAGIEPFPKTPISWSKVPYYKTEVLPLLKQHKVIYFTHTDSRLANNDIPHSIQKLRCRVNYRALKYSAPIEEFGNTLVSRMQQNGSSYLALHLRYEKDMLAFTGCSHNLTAEEDEELRQMRYEVSHWKEKEINGTERRLLGGCPLTPRETSLLLKALGFPSHTRIYLVAGDAYGRGSMKYLKDDFPNIFSHSSLSSEEELNPFKNHQNMLAGIDYVVALKSDVFLYTYDGNMAKAIQGHRRFENFKKTINPDKMNFVNLVDQLDEGKISWKKFSSKVRKLHEDRIGAPYRREPGEFPKLEESFYANPLPGCICETR* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2618 615 PIRSF UCP009360 77 615 IPR024709 -
Vra7g2618 615 MobiDBLite consensus disorder prediction 1 26 - -
Vra7g2618 615 Pfam GDP-fucose protein O-fucosyltransferase 226 541 IPR019378 -
Vra7g2618 615 MobiDBLite consensus disorder prediction 40 63 - -
Vra7g2618 615 PANTHER O-FUCOSYLTRANSFERASE 28 175 614 - -
Vra7g2618 615 CDD O-FucT_plant 226 547 IPR024709 -
Vra7g2618 615 PANTHER OS02G0726500 PROTEIN-RELATED 175 614 - -
Vra7g2618 615 MobiDBLite consensus disorder prediction 1 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2618 Vra-Chr7 46421600 46428351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2618 154 612 Miscellaneous Gene Families AT2G37980 61.242 0.0 621
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2618 - - gmx:100801100 1142.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2618 7 46421600 46428351 Vra7g2618 7 46421600 46428351 ECH
Vra7g2618 7 46421600 46428351 Vra5g0263 5 2421632 2426278 PCT