Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0263 ATGGCGCACAATAGCAGCAACAGCACCGCGGCCGTGGATGGCGGTCGAGTCAACAGCCCACGTTACGTCGGCTCAATGACTCGCCGAGCCCACTCGTTCAAACGCAAGAACAACAACCATGAAATTGAGCTTCAAATCAACTCGCCCAGATCCCCCTTGGCTCCTGCTGAAGGGTCTGTTTTGAAAAGGAATAATATTCACCAGCATCACAATCATCATGTGAGCCACAAGGAGAAAAGGAACAAGTTTGGGCACTGGGTGTTTTTTCTCTTCTGTGGGGTGTGCTTTTTTGTGGGTCTTCTCAAGATTTGTGCCACTGCCTGGTGGTTCCGATCTTCAGTACACAGTACACGTGAATCCTTTCAGGAACTGTCTGACTCCATTAATAATCGAAATCTAATGGATCAAAGCTCCCATGGTTATGCACATAGGGAAGGAGCAAGTGAGGCTGAAAGAACCCAAAAGATGGTAACTGCAGGAATGATTGACAGCCACACTGACATGGCTGAAGAATCAGGAATCTGGTCTAATCCCAACTATGAGAATTTCGCCCAATGTATAGACCTGTCAAGAAATCATAAAAAGCTTGATGCGAAGACCAACGGCTACATTCTAGTTAATGCTAATGGTGGTCTGAATCAAATGAGATTTGGGATATGTGATATGGTTGCTGTTGCTAAGATTATGAAGGCAACACTTGTTCTTCCTTCTCTTGATCACACTTCGTACTGGGGTGATGCAAGTGGCTTCAAGGATTTGTTTGACTGGAAACATTTTATTGAGACACTGAAGGATGATATCCAAGTAGTTGAGACATTACCACCTGCTTATGCTGAAATTGAACCTTTCTCCAAAACTCCCATATCTTGGTCTAAGGCCAGTTATTACAAGAATGAGGTTCTTCCTGTACTAAAGCAGCACAAAGTGATCTATTTCACCCATTCTGATTCCAGGCTTGCTAATAATGGAATACCAAGCTCAATACAAAAACTAAGATGTCGTGTAAATTATAGAGCACTGAAATATTCCTCTCCAATTGAAGAATTTGGAAACAAATTAATATACAGAATGCGACAGAATGATAGTCCTTATCTTGCGCTTCATTTGAGGTATGAGAAGGATATGCTTGCATTTACAGGCTGCAGTCACAATTTGACTGCAGAGGAAGATGAAGAACTACGACAGATGCGATATGAAGTCGGTCACTGGAAGGAGAAGGAGATTAATGGAACTGAGAGGAGATTGGCAGGGGGTTGTCCATTAACTCCCAGGGAAACTTCCCTATTGCTTAGAGCACTAGGTTTTACATCACAAACCAGGATTTATTTGGTAGCCGGTGAATCGTATGGTAGAGGAAGTATGAAATACCTTGAGGATGACTTCCCCAACATTTTCTCTCATTCCTCTCTGTCTTCCAAAGAAGAGTTGAATCCTTATAAGAATCACCAGAACATGTTAGCTGGTATAGACTATATTGTTGCACTTCAGAGTGATATATTTCTCTACACTTATGATGGGAATATGGCAAAAGCAGTACAAGGTCATAGGCGCTTTGAAAACTTCAAGAAGACCATCAATCCAGACAAGGCAAATTTTGTTAAACTCGTTGATAAGTTGGATGAAGGAAAGATTTCTTGGGAGAAGTTCAGGTCCAAGGTAAAAATACTTCACAAAGACCGAATGGGTGCTCCATATCTTAGGGAGCATGGAGAATTTCCTAAGCTGGAGGAAAGTTTTTATGCAAATCCTATGCCAGGATGTATATGTGAAAGAAAACAAGATTAA 1785 0.4185 MAHNSSNSTAAVDGGRVNSPRYVGSMTRRAHSFKRKNNNHEIELQINSPRSPLAPAEGSVLKRNNIHQHHNHHVSHKEKRNKFGHWVFFLFCGVCFFVGLLKICATAWWFRSSVHSTRESFQELSDSINNRNLMDQSSHGYAHREGASEAERTQKMVTAGMIDSHTDMAEESGIWSNPNYENFAQCIDLSRNHKKLDAKTNGYILVNANGGLNQMRFGICDMVAVAKIMKATLVLPSLDHTSYWGDASGFKDLFDWKHFIETLKDDIQVVETLPPAYAEIEPFSKTPISWSKASYYKNEVLPVLKQHKVIYFTHSDSRLANNGIPSSIQKLRCRVNYRALKYSSPIEEFGNKLIYRMRQNDSPYLALHLRYEKDMLAFTGCSHNLTAEEDEELRQMRYEVGHWKEKEINGTERRLAGGCPLTPRETSLLLRALGFTSQTRIYLVAGESYGRGSMKYLEDDFPNIFSHSSLSSKEELNPYKNHQNMLAGIDYIVALQSDIFLYTYDGNMAKAVQGHRRFENFKKTINPDKANFVKLVDKLDEGKISWEKFRSKVKILHKDRMGAPYLREHGEFPKLEESFYANPMPGCICERKQD* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0263 594 PANTHER O-FUCOSYLTRANSFERASE 28 76 593 - -
Vra5g0263 594 MobiDBLite consensus disorder prediction 1 22 - -
Vra5g0263 594 Pfam GDP-fucose protein O-fucosyltransferase 203 518 IPR019378 -
Vra5g0263 594 PANTHER OS02G0726500 PROTEIN-RELATED 76 593 - -
Vra5g0263 594 CDD O-FucT_plant 203 524 IPR024709 -
Vra5g0263 594 PIRSF UCP009360 50 593 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0263 Vra-Chr5 2421632 2426278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0263 89 593 Miscellaneous Gene Families AT2G37980 56.346 0.0 616
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0263 - - gmx:100807090 1053.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0263 5 2421632 2426278 Vra5g0263 5 2421632 2426278 ECH
Vra7g2618 7 46421600 46428351 Vra5g0263 5 2421632 2426278 PCT