Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vra7g2609 | ATGCTGCGTTTTAGAACGCCGTTGTTACATCCTTTTTCTCTGACGTTCTCTGCCTCTAACCAGCTCCGTAAGGTTCAAGCACGCCCCTTCAGATCTTCCATAAAGATGACGTCAGCAAAAACGGTGGAGCACATTGTCCTTTTCAAGGTGAAGGAGGAGACGGAGGCGTCAAAGGTAAGTGAAATGGTGAACGGACTCGGTTCTCTCCTGTCGCTGGACACCGTCCTCCACCTCAGCGTGGGCCCGCTCCTCCGTAACCGATCCTCTTCTTTAACTTTCACTCACATGCTCCATACCCGCTACAAGTCCAAGGAGGATCTCCAAGCCTACTCCGCCCACCCCAGCCACGTCACCGTCGTCAAGGAAAACGTGCTCCCCATCATCGACGACATCATGGCTGTCGATTGGGTCGCCGATGGCATCAGCAACCTCGTTCCGCCGCCGGGCTCGGCTCTTCGTGTCAGCTTCTTAAAATTGAAGGAGGGCGCAGCTGGAGACGAGGTTTTGGGTGTGGTTAGAGGAATTCCTGAGAATTTCAAGCAGATTAGTGAGTTCAGTTTTGGGGAGAATTTTTCGCCGGGGAGAGCCAAGGGTTTCTCGATTGCTTCGCTCGCGGTTTTCGCGGGACCGACCGAGTTGGAGGCCGTGGATTCGAATCAGGAGTTGGTGAATTACCAGAAGGACAAGGTTAGGGATCAGATCGACAGTGTGGTCGTTGTTGATTACGTGGTTCCGCCACCTCCTCCTGCCCAGAGTGCGAGCCTTTGA | 768 | 0.5391 | MLRFRTPLLHPFSLTFSASNQLRKVQARPFRSSIKMTSAKTVEHIVLFKVKEETEASKVSEMVNGLGSLLSLDTVLHLSVGPLLRNRSSSLTFTHMLHTRYKSKEDLQAYSAHPSHVTVVKENVLPIIDDIMAVDWVADGISNLVPPPGSALRVSFLKLKEGAAGDEVLGVVRGIPENFKQISEFSFGENFSPGRAKGFSIASLAVFAGPTELEAVDSNQELVNYQKDKVRDQIDSVVVVDYVVPPPPPAQSASL* | 256 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vra7g2609 | 255 | Gene3D | - | 152 | 246 | - | - | |
| Vra7g2609 | 255 | SMART | Dabb_2 | 151 | 244 | IPR013097 | - | |
| Vra7g2609 | 255 | SMART | Dabb_2 | 42 | 138 | IPR013097 | - | |
| Vra7g2609 | 255 | PANTHER | - | 27 | 250 | IPR044662 | - | |
| Vra7g2609 | 255 | Pfam | Stress responsive A/B Barrel Domain | 42 | 137 | IPR013097 | - | |
| Vra7g2609 | 255 | Pfam | Stress responsive A/B Barrel Domain | 153 | 244 | IPR013097 | - | |
| Vra7g2609 | 255 | Gene3D | - | 33 | 140 | - | - | |
| Vra7g2609 | 255 | SUPERFAMILY | Dimeric alpha+beta barrel | 152 | 247 | IPR011008 | - | |
| Vra7g2609 | 255 | PANTHER | STRESS-RESPONSE A/B BARREL DOMAIN-CONTAINING PROTEIN UP3 | 27 | 250 | - | - | |
| Vra7g2609 | 255 | ProSiteProfiles | Stress-response A/B barrel domain profile. | 42 | 136 | IPR013097 | - | |
| Vra7g2609 | 255 | ProSiteProfiles | Stress-response A/B barrel domain profile. | 151 | 242 | IPR013097 | - | |
| Vra7g2609 | 255 | SUPERFAMILY | Dimeric alpha+beta barrel | 40 | 144 | IPR011008 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vra7g2609 | Vra-Chr7 | 46346829 | 46348099 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vra7g2609 | - | - | gmx:100527770 | 370.548 |
Event-related genes