Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2606 ATGCTAAAAATTTCCACCTCTCCTTCTCTCACAGTTTTCAGAAACATCGTGAGAAAATTGCAAGGGAAAGGAATGGCTTCAACTTCAGCAGTTTCAATGTCTCTCCCACTAACTCACACCGCCCAGAAGAAGGTTGTGCCCACTTCCGAGGCATTGTTGAAGGCACCGTTATCTCTGCGAACTTCAAAGGGTGTGGCAGTGTCCAAAACCAATGGAAGAAGGTTTGAGGTGAGGGCATCCATGAAAGAGAAAGTTGTGACGGGTTTGACTGCAGCTGCATTGACGGCTTCCATGATGGTTCCGGATGTGGCTGAAGCCGCCGTAACGCCTTCTCTCAAGAATTTCTTGCTCAGTATCGCCGCTGGTGGAGTTGTGGCTGTCGTGATTGTCGGTGTCGTCATTGGTGTTTCCAACTTCGATCCCGTCAAACGAAGCTGA 438 0.4909 MLKISTSPSLTVFRNIVRKLQGKGMASTSAVSMSLPLTHTAQKKVVPTSEALLKAPLSLRTSKGVAVSKTNGRRFEVRASMKEKVVTGLTAAALTASMMVPDVAEAAVTPSLKNFLLSIAAGGVVAVVIVGVVIGVSNFDPVKRS* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2606 145 PANTHER EXPRESSED PROTEIN 25 145 - -
Vra7g2606 145 Gene3D Single helix bin 107 145 - -
Vra7g2606 145 Pfam Photosystem II reaction centre X protein (PsbX) 108 145 IPR009518 GO:0009523|GO:0015979|GO:0016020
Vra7g2606 145 PANTHER OS07G0673550 PROTEIN 25 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2606 Vra-Chr7 46320367 46320976 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2606 - - vra:106767477 247.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2606 7 46320367 46320976 Vra7g2606 7 46320367 46320976 ECH
Vra7g2606 7 46320367 46320976 Vra5g0273 5 2545590 2546161 PCT