Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2604 ATGAGTTTCATCTTCGGAAAGAGGAAAACCCCTGCAGAAATCGTGAGAGAGAATAAGAGAATGCTGGACAAATCAATTAGAGAGATAGAACGAGAAAGACAAGTTTTGCAGTCACAGGAGAAGAAACTGATTTTGGAGATAAAGAAAAGTGCCAAACAAGGCCAGATGGGAGCTGTTAAAGTGATGGCAAAAGATCTTGTTAGAACTAGACATCAGATTGAAAAGTTTTACAAGCTCAAATCGCAGCTCCAGGGTGTATCCCTCAGAATTCAAACTTTGAAATCAACACAAGCGATGGGTGAGGCAATGAAAGGGGTGACTAAGGCAATGGGACAGATGAACAGACAGATGAACTTGCCATCATTGCAGAAAATCTTACAGGAATTTGAGTATCAGAATGATAGGATGGAATTGATTACAGAGGTGATGGGAGACACGATAGATGATGCTTTTGAAGGGGATGAGGAAGAAGAAGAAACAGAAGAACTGGTGAATCAGGTTCTTGATGAGATTGGTATCAACATCAACCAAGAGCTTCTGAATGCACCATCAACAGCTGTTGCTGTTCCAGCTGCAAAGACCAAAGTGCCTCAAGTTGAAACTGCTGGGGATGATGCCGCCCTAGATAGCAATTTACAAGCAAGGTTAGACAATTTAAGAAAAATGTAA 669 0.4111 MSFIFGKRKTPAEIVRENKRMLDKSIREIERERQVLQSQEKKLILEIKKSAKQGQMGAVKVMAKDLVRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKILQEFEYQNDRMELITEVMGDTIDDAFEGDEEEEETEELVNQVLDEIGININQELLNAPSTAVAVPAAKTKVPQVETAGDDAALDSNLQARLDNLRKM* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2604 222 Pfam Snf7 17 186 IPR005024 GO:0007034
Vra7g2604 222 Gene3D - 6 180 - -
Vra7g2604 222 Coils Coil 12 46 - -
Vra7g2604 222 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 2 HOMOLOG 1-LIKE 1 222 - -
Vra7g2604 222 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 1 222 IPR005024 GO:0007034
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2604 Vra-Chr7 46313983 46316960 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2604 K12191 - gmx:100819241 352.443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2604 7 46313983 46316960 Vra7g2604 7 46313983 46316960 ECH
Vra7g2604 7 46313983 46316960 Vra5g0277 5 2579223 2583887 PCT