Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2599 ATGTCTACAGCTGAAGGTGGTAAAAGTAGTGCTGAAGAGAACAATTTGCCATTAAAAGATGTTGAAACCGTAGACAAAGCTCTGCGCAGAGAGAAAAGCTCTTCCAAGAATTCAAAATCTTCGAAATCTCAGTTATTTGATCCTAAACCAAAGGTTAAAGATAGCGAAGAAGATAACTTACGTAAGGATAAGAAGTCTGTATGGAACTGGAAATCATTGAAGGCCCTTTCCCTGTCTCGCAGTAAGAAGTTCAATTGTAGTTTTTCTGTAAAAGTCCATGTGATTGAAGGGTTGCCTTCGAGTTTCAGTGATTCTTTCCTTTGTGTGTATTGGAAGAGGAAGGATACGCTTTTGGTGACCCCTCCGGCCAAGGTGATTCAAGGTGTGGCTGAGTTTCAAGACATTTTGACACACACTTGCTCAATCAATGGAAGTAGGAGTGGACCCCAAAACTCTGCCAAATATGAAGCCAAGCCTTTTATGCTCTATGCTTCTAAGGTGGGTGTCCCACAAGTTGATTTGGGGAAGCACAGAGTGGACCTCACAGGGTTGCTTCCTCTCACTCTGGAAGAGCTTGAAGAGGAGAAAAGGTCAGGGATATGGACTACAAGTTTTAGACTATCAGGAACAGCAAGGGGTGCAGTAATGAATGTCAGTTTTGGGTATGTCATTGTTGGTGACAATACTAGTGCTGCCAGAGACAACCTTTGTGATCCTCTTAATGCACTAACTACCAAGAAAAATGGTATGCCTTTGTTGGAACCAGATAAAAAACCTAGTCAGGTTGATGGGAGTAAAGATTTGCCAAGCTTTTCCAGTGATGATTATTCATCTCAAAATGTAGATGAGGTGAAAGATCTTCATGAGGTTTTGCCATCATCAAATTCAGCTCGAACCAGCCCAGTATACATCTCATGTAAAGAATTTGTTGAAGAAAGGAGTTGTAGTCCTCTGCATGGCAAACCTGAACTCGAGGGAATTAAAGAAAACATCGACCCGATCAAACCAGTTGTTTGTTCTTCATTTGATAATGAAAAGGACAAGGCAGAAGAGAATCAAGGCGATGAGGGAAAAACATGCAGTCCAATGCATGACAAACCAGAAGTTTTTGTGTTTCAACAAAACCTGGACACAGTTACGCCACATGACTATCCTTTACCTGATTCTGGAATAGAAAATTTCAAAGAATGTGAAGGTAATGAATTTTCTGTTCTTGACAAGGGCATTGAATTTTCATCAGATGAACATGATAAACTAGAGGAATCTATTGGAAAAGCTTTTATCGATGTCTACACAGTTGACAGTACTCGGACCCTTGATAATACTGGTATACAAGTATCTTTTAAAGACCATGATAACCAAGATTCCCTTGAAGAACTAAACGATAATTTTAAGGAAAGTGCTGTGGTACGTGAATTTTCTAATCGAAAGGATGACTTGCCAACGAAAGAACACCTACTGCAAGAACTAGAATCTGCTTTAACTAGTGTCTTAGAGTTGGAGACAGCGGCAATGGATTCTCCTGTAGCCATGGAAGCCAAATCTGAAGATAAGTTGAGAAAGTCAAAAAGCTTGGATGATGTTACAGAATCAGTTGCCAGTGAGTTTTTAAGTATGCTTGGCATAGACAATAGTCCAAGGGGTTTGAGTTTTGAAGGTGAGACAGAGTCTCCAAGAGAGCTCCTTTTAAGACAATTTGAGAATGAAGTTCGTTCAGAGGGCTTCTCTTTGTTTGATTTTGACATAGGCAGTGATGATGATGAAGCAGATAGTGGTAATGATTCTTCTTATGGATCTGAGCATTGGAAGTTCTCTAAGGATACTAAGTCAGCATCCTTAATGCAAGATGTACACAAAGGGCATCTAATCGAGTTTGAGGATGTGAGGAGCAAACAGAAGGTCCATATGCTAGAACACTCGGAAACAAAAGCCTTAATGCATGAATGGGGTTTGAATGAGATGGCTTTTCAGCATTCTCCTAAAAAAGATCATAATGGCTTAGGAAGTCCAATATATTTTCTTCCCGAAGAGACTCTACCATTACCTCCTCTAGCAGAGGGTTTAGGTCCTTTTCTTCAGACCGAAGATGGGGGCTTTCTACGGTCAATGAATCCCACACTCTTCAGGAAAAGTAGAGCTGGTGGAACATTAATCATGCAGGTTTCCAACCCAATTGTGGTGCCCGCTGAAATGGGTACTGGGATAATGGAGATTTTGCAGTGTTTTGCTTCTGTGGGAATTGAAAAACTTTCCAAGCAGGCAAACAAGTTAATGCCTCTACAAGACATCACGGGAAAGACAATGCAACAAATATCAAGGGAAGCAAAGCCAGTCTTGGGGGCAAAATACAGGCAATTACATGTGCAGCATAATTTGGTAACAGGACAGGATTCTACTTGTGCGCAGAAAGGCTTGAAGGGAATTCTATATGATGGACAAATGCCTAATAAGTTCAGTTCAGATTCAGCTGGAGACCACAGAAGCTCAGATCTTGCTCTATTGGCTATGGATAAAATTGAAGCACTTTCACTGGAGGGTTTGAGAATACAATCTGGGATGTCAAATGGGGATGCACCATCAAACATCATTGCAGAATCCTATGGGGATATTTCAGCTCTGCAAGGCAAGGGGGCTGGTACTAGGGGCTCCCTTGGGCTAGATGGATCTGCTGCCATGGAATTGTTGGATATGAAAAACAGCAACAGTGATGAATATGAAGGAGTTGACGACATAATGGCCCTATCATTGACTTTAGATGAATGGATGAGGTTGGATTCTGGTGAGATCGATGATGATATAGAGAACATCAGTGAGCATACATACAAACTTCTTGCTGCCCATCATGCAAACTCTTTTGACTTGATACGTGGGAAGAGTTCAAAGGGAGAGACAAAAAAAGGGAGGAAATATGGTTTGTTAGGAAACAAATTCATAGTAGCTCTCATGGAGCAGCTTCGTGATCCTCTGAGAAACTATGAGCCTGTTGGGACACCGATGCTTGGTCTTATACAAGTGGAGAGAGTGTTCATCCAACCAAAGCAAGAGATTTATAGGCCGTTGTGTGAGGCAGGGAAGGAAAGTGATGAGTGTGAAATAGTGGCGAAGGTGGAGATGAAGGGGAAGAGAGAAGTGAAAAGTAGTGAAGAAGAGGGCATTCCTCAATTCAAAATTACAGAAGTGCATGTTGCAGGTGTGCAGAAAAGGAAGTTTTGGAGCAGTTCGGGACGACGCCGACAACAAGAACAATCTGCTTCCCGGTGGTTGATTGCTAATGGAATGGGGAAGAACTTTGAGAATCCAGTGCTCAAGTCAAATGCTCCAATCACTACCACAAACGGGCAACCGGGTGACTCATTGTGGAGCATATCATCTCGTATTTATGGTACACTCACAAGATGGAATTGGTAA 3408 0.4175 MSTAEGGKSSAEENNLPLKDVETVDKALRREKSSSKNSKSSKSQLFDPKPKVKDSEEDNLRKDKKSVWNWKSLKALSLSRSKKFNCSFSVKVHVIEGLPSSFSDSFLCVYWKRKDTLLVTPPAKVIQGVAEFQDILTHTCSINGSRSGPQNSAKYEAKPFMLYASKVGVPQVDLGKHRVDLTGLLPLTLEELEEEKRSGIWTTSFRLSGTARGAVMNVSFGYVIVGDNTSAARDNLCDPLNALTTKKNGMPLLEPDKKPSQVDGSKDLPSFSSDDYSSQNVDEVKDLHEVLPSSNSARTSPVYISCKEFVEERSCSPLHGKPELEGIKENIDPIKPVVCSSFDNEKDKAEENQGDEGKTCSPMHDKPEVFVFQQNLDTVTPHDYPLPDSGIENFKECEGNEFSVLDKGIEFSSDEHDKLEESIGKAFIDVYTVDSTRTLDNTGIQVSFKDHDNQDSLEELNDNFKESAVVREFSNRKDDLPTKEHLLQELESALTSVLELETAAMDSPVAMEAKSEDKLRKSKSLDDVTESVASEFLSMLGIDNSPRGLSFEGETESPRELLLRQFENEVRSEGFSLFDFDIGSDDDEADSGNDSSYGSEHWKFSKDTKSASLMQDVHKGHLIEFEDVRSKQKVHMLEHSETKALMHEWGLNEMAFQHSPKKDHNGLGSPIYFLPEETLPLPPLAEGLGPFLQTEDGGFLRSMNPTLFRKSRAGGTLIMQVSNPIVVPAEMGTGIMEILQCFASVGIEKLSKQANKLMPLQDITGKTMQQISREAKPVLGAKYRQLHVQHNLVTGQDSTCAQKGLKGILYDGQMPNKFSSDSAGDHRSSDLALLAMDKIEALSLEGLRIQSGMSNGDAPSNIIAESYGDISALQGKGAGTRGSLGLDGSAAMELLDMKNSNSDEYEGVDDIMALSLTLDEWMRLDSGEIDDDIENISEHTYKLLAAHHANSFDLIRGKSSKGETKKGRKYGLLGNKFIVALMEQLRDPLRNYEPVGTPMLGLIQVERVFIQPKQEIYRPLCEAGKESDECEIVAKVEMKGKREVKSSEEEGIPQFKITEVHVAGVQKRKFWSSSGRRRQQEQSASRWLIANGMGKNFENPVLKSNAPITTTNGQPGDSLWSISSRIYGTLTRWNW* 1136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2599 1135 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 8 1134 - -
Vra7g2599 1135 MobiDBLite consensus disorder prediction 247 278 - -
Vra7g2599 1135 MobiDBLite consensus disorder prediction 1 58 - -
Vra7g2599 1135 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 81 222 IPR019448 -
Vra7g2599 1135 ProSiteProfiles C2 NT-type domain profile. 76 224 IPR019448 -
Vra7g2599 1135 MobiDBLite consensus disorder prediction 18 37 - -
Vra7g2599 1135 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 8 1134 IPR039614 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2599 Vra-Chr7 46252130 46256545 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2599 - - pvu:PHAVU_003G133300g 1249.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2599 7 46252130 46256545 Vra7g2599 7 46252130 46256545 ECH
Vra7g2599 7 46252130 46256545 Vra5g0280 5 2642445 2646905 PCT