Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2576 ATGAGCAACGAAAAGGATACCTTCAACGTCGCCGATCTCTCCTCTGTTCTCAACGAGGAAAATCGAGCAGACCTTGTCAATGCTCTTAAGAGCAAGATACAGAGTTTGGCTGGGCAGCATTCCGACATTCTCGAGTCGTTGTCACCTAACGTCAGGAAGCGTGTTGAGTTTCTTAGAGAGATCCAGGGTCAACACGATGAATTAGAGGCTAAATTTTTTGAGGAGAGAGCAGCTCTCGAGGCCAAATACCAAAAATTGTATCAACCATTGTACACAAAGCGGTATGACATAGTAAATGGTGTTACCGAAGTGGAAGAAGCGGCAGTGAATGAAACAACACCCGATGGTGGGGACGATGAAGAGAAAGGAGTGCCTGCGTTTTGGCTTACTGCAATGAAAAACAATGAAGTGTTAGCTGAGGAGATTTCAGAGCGTGATGAAGGTGCTCTCAAGTTTCTCAAAGATATCAAGTGGAGCAGGATAGAAAATCCTAAAGGATTCAAGCTTGAGTTTTTCTTTGATACCAATCCTTATTTTACCAATACTGTCTTGACCAAAACATATCATATGATTGACGAGGATGAACCAATTTTGGAGAAAGCAATTGGGACTGAAATTCAATGGCACCCAGGAAAATGCCTGACACAGAAGATTCTCAAGAAAAAGCCCAAGAAGGGTTCAAAGAATGCTAAACCAATTACCAAAACTGAAAATTGTGAAAGTTTCTTCAATTTCTTCAATCCACCACAAGTTCCTGAAGACGATGAAGATATCGAGGAAGATGCGGCTGAGGAGCTTCAGAATCAGATGGAACAAGACTATGACATTGGGTCAACAATAAGAGACAAGATTATTCCCCATGCTGTGTCATGGTTTACTGGAGAGGCTATCCAGGGAGATGAATTTGGAGAACTAGAGGAGGACGAGGATGATGAAGATATCGAAGAGGAGGACGACGATGAGGAAGACGATGAAGAGGACGAGGATGATGAAGATGACGAGGAAGAAAACAAGACTAAAAAGAGGTCATCAGCATCCAAGAAGAGTGGAAGAGCACAGCTTGGTGAGGGTCAGCAGGGTGAGCGACCTCCAGAGTGCAAGCAGCAGTAG 1110 0.4369 MSNEKDTFNVADLSSVLNEENRADLVNALKSKIQSLAGQHSDILESLSPNVRKRVEFLREIQGQHDELEAKFFEERAALEAKYQKLYQPLYTKRYDIVNGVTEVEEAAVNETTPDGGDDEEKGVPAFWLTAMKNNEVLAEEISERDEGALKFLKDIKWSRIENPKGFKLEFFFDTNPYFTNTVLTKTYHMIDEDEPILEKAIGTEIQWHPGKCLTQKILKKKPKKGSKNAKPITKTENCESFFNFFNPPQVPEDDEDIEEDAAEELQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAIQGDEFGELEEDEDDEDIEEEDDDEEDDEEDEDDEDDEEENKTKKRSSASKKSGRAQLGEGQQGERPPECKQQ* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2576 369 Gene3D - 45 104 - -
Vra7g2576 369 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 1 369 IPR002164 GO:0005634|GO:0006334
Vra7g2576 369 Pfam Nucleosome assembly protein (NAP) 53 295 IPR002164 GO:0005634|GO:0006334
Vra7g2576 369 MobiDBLite consensus disorder prediction 300 334 - -
Vra7g2576 369 MobiDBLite consensus disorder prediction 295 369 - -
Vra7g2576 369 PANTHER NUCLEOSOME ASSEMBLY PROTEIN 1,2 1 369 - -
Vra7g2576 369 Gene3D Nucleosome assembly protein 119 295 - -
Vra7g2576 369 SUPERFAMILY NAP-like 30 294 IPR037231 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2576 Vra-Chr7 46064574 46067538 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2576 K11279 - gmx:100785314 577.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2576 7 46064574 46067538 Vra7g2576 7 46064574 46067538 ECH
Vra7g2576 7 46064574 46067538 Vra5g0301 5 2839738 2843051 PCT