Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0301 ATGTCCAACAACAACGAAAACATCACCATGACCGATCTCACTTCTGCCCTCAACGAAGACAATCGCGCCGATCTAGTCAGTGCTCTCAAGAGTAAGATACAGAGTCTGGCTGGACAGCATTCGGATGTTCTCGAGACTTTATCGCCTAACGTCAGGAAGCGTGTTGAATCTCTTAGAGAGATTCAGGGTAAACATGATGAACTAGAGGCAGAATTCTTCAAGGAGAGAGAAGCTCTTGAAGCTAAGTACCAAAAGTTGTATCAGCCGTTATACACAAAGCGCTATGAAATAGTAAATGGTGTTACTGAAGTTGAAGGAGCAGCAGTTGAAACAACTGATGGATCAGAAGAGGATAATGAGAAAGGAGTACCTTCTTTTTGGCTCAATGCAATGAAAAATAATGATGTGTTGGCTGAAGAGATTTCAGAGCGTGATGAAGCTGCTCTCAAGTTTCTAAAAGACATTAAGTGGATCCGGATAGATAGCCCTAAAGGATTCAAGCTTGAGTTCTTTTTTGATACCAATCCGTACTTTTCAAACTCTGTCTTGACTAAAACATATCATATGATTGATGAGGATGAACCTATATTGGAGAAAGCAATTGGGACGGAAATTGAATGGTACCCGGGAAAATGCTTGACTCAGAAGGTGTTGAAGAAAAAGCCCAAGAAAGGTTCAAAGAATGCTAAGCCAATTACCAAAACTGAAAATTGTGAAAGCTTCTTCAATTTTTTCAAACCACCAGAAGTTCCTGAAGATGATGATGACATTGATGAAGATTTGGCCGAGGAACTTCAGAATCAAATGGAACAAGATTATGACATTGGGTCAACTATAAGGGACAAAATTATCCCTCATGCTGTATCTTGGTTTACTGGGGAGGCTGTTCAGGGAGATGAGTTTGAAGACCTCGAGGATGATGAGGACGAAGATGATGATGAGGAAGATGATGAGGAGGATGATGATGAAGATGATGATGACGATGAAGAAGAGGAGGAAGACAGTAAGACTAAAAAGAAGAAGAGCGGAAGGGCACAGATTGGTGATGGTCAGCAGGGTGAGCGACCTCCAGAGTGCAAGCAGCAGTAA 1089 0.4169 MSNNNENITMTDLTSALNEDNRADLVSALKSKIQSLAGQHSDVLETLSPNVRKRVESLREIQGKHDELEAEFFKEREALEAKYQKLYQPLYTKRYEIVNGVTEVEGAAVETTDGSEEDNEKGVPSFWLNAMKNNDVLAEEISERDEAALKFLKDIKWIRIDSPKGFKLEFFFDTNPYFSNSVLTKTYHMIDEDEPILEKAIGTEIEWYPGKCLTQKVLKKKPKKGSKNAKPITKTENCESFFNFFKPPEVPEDDDDIDEDLAEELQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAVQGDEFEDLEDDEDEDDDEEDDEEDDDEDDDDDEEEEEDSKTKKKKSGRAQIGDGQQGERPPECKQQ* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0301 362 Pfam Nucleosome assembly protein (NAP) 53 294 IPR002164 GO:0005634|GO:0006334
Vra5g0301 362 SUPERFAMILY NAP-like 30 293 IPR037231 -
Vra5g0301 362 PANTHER NUCLEOSOME ASSEMBLY PROTEIN 1,2 1 362 - -
Vra5g0301 362 MobiDBLite consensus disorder prediction 298 332 - -
Vra5g0301 362 MobiDBLite consensus disorder prediction 293 362 - -
Vra5g0301 362 Gene3D - 45 104 - -
Vra5g0301 362 Gene3D Nucleosome assembly protein 118 294 - -
Vra5g0301 362 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 1 362 IPR002164 GO:0005634|GO:0006334
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0301 Vra-Chr5 2839738 2843051 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0301 K11279 - gmx:100783783 543.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2576 7 46064574 46067538 Vra5g0301 5 2839738 2843051 PCT