Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2565 ATGGCAGACCCAGCAAGTTTCATTGCCAGCTGGTTAACTCCCTCTTCTCTCTTCATCTTCGTCAACCTCGTCATAGGAACAATAGCAATCACTTCTCGCTTCACTTCCAAAAACCACCACCCTCATCTCGCTCCTTCACCCTCTCTTGTACAACGAGTCAGCTCCTTCAATCTCACTCACTACTATACCCATCATCACCACCCAGACCCAGACTTCACTCACCCCCAACTCGTTCCAACACCCTCGTTATTGCAGCGAGTCAAGTCCTTCAATCTCTCCTTCCGCAAACTCGAACCCACACATGCAGAAATACAGAACCTCCAACCCCAACACGCCCAACCTACAAACCCGGAACTGGTTCGGACACCCTCCCGGTTGGAGCGCCTCACATCTCTCGATCTTTCTCTTACGAATCAAGAACCCACGAATGCACAAACACAGCACGTGCAACCCGAAGCAGAACCAGAACAGCCAGAACTGGTTCGGAGTCCCTCGCTCTTGCAGCGGCTACAGTCCATAAACTTGTCGCGTCTGTATAGATCGGAGTCCATACACGGAGAGGATCCGAGTGACGGGTCGGGTAAGGCGGAGATGAGGAAATCGGCGAGCGAGAGAAGGGGCTCGATAGAACGCGAAGAGGAAGAGGAGGTGGAGAGACGGAGACCACAAACGGCGAGGGTTGAAGCGACGTCGTGTAGAGAAGACGAAGAGGTGGACGCGAAAGCTGATGATTTCATCAATAGGTTCAAGAAGCAGTTGAGATTGCAGAGGATTGACTCTCTTATCCGTTACAGAACAGGTAGCTGA 807 0.5192 MADPASFIASWLTPSSLFIFVNLVIGTIAITSRFTSKNHHPHLAPSPSLVQRVSSFNLTHYYTHHHHPDPDFTHPQLVPTPSLLQRVKSFNLSFRKLEPTHAEIQNLQPQHAQPTNPELVRTPSRLERLTSLDLSLTNQEPTNAQTQHVQPEAEPEQPELVRSPSLLQRLQSINLSRLYRSESIHGEDPSDGSGKAEMRKSASERRGSIEREEEEEVERRRPQTARVEATSCREDEEVDAKADDFINRFKKQLRLQRIDSLIRYRTGS* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2565 268 MobiDBLite consensus disorder prediction 136 164 - -
Vra7g2565 268 PANTHER COTTON FIBER (DUF761) 193 265 - -
Vra7g2565 268 PANTHER COTTON FIBER (DUF761) 3 66 - -
Vra7g2565 268 MobiDBLite consensus disorder prediction 136 152 - -
Vra7g2565 268 Pfam Cotton fibre expressed protein 235 265 IPR008480 -
Vra7g2565 268 Pfam Domain of unknown function (DUF4408) 6 34 IPR025520 -
Vra7g2565 268 PANTHER DUF4408 DOMAIN PROTEIN 193 265 - -
Vra7g2565 268 PANTHER DUF4408 DOMAIN PROTEIN 3 66 - -
Vra7g2565 268 MobiDBLite consensus disorder prediction 181 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2565 Vra-Chr7 45970683 45971781 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2565 - - var:108322704 450.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2565 7 45970683 45971781 Vra7g2565 7 45970683 45971781 ECH
Vra7g2565 7 45970683 45971781 Vra5g0307 5 2916606 2917731 PCT