Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2562 ATGGCGGTGAAGAAGGCACGAATTGTGATCGTTGGAGCAGGAATGGCGGGCATCACTGCTGCCAACAGGCTTCACAGTGTGAGTGCCTCAAAGAACTTGTTTGAGGTGTGTGTTGTGGAAGGTGGAAACAGGATTGGTGGGAGAATCAACACTTCAGAGTTTGGTGGTGACCGGATTGAGATGGGTGCTACTTGGATCCATGGAATTGAAGGAAGTCCAATTCACAAAATAGCTCAACAAATCCATGCACTTGAGTCTCAACAGCCTTGGGAGTGCATGGATGGGAACGACAACAAGGCCACCACCATTGCTGAAGGTGGCTTTGTGCTAAACCCTTCCTTTGTTCACCCCATCACCGAGCTTTTCAACAATCTCATGGACCATGCTCAGGGAAAGATGTCAACAGCAACAACCAAGGGTGAGAGCGGAATCCTCAGTATTGGTTCTTTTCTCAGACAAGGCCTTGCTGCTTATTGGGATTCATCGAAAGAGGAAAAGGAGCTGAAAGGGTTCGGAAAGTGGAGTAGGAAGTTGCTTGATGAAGCAATCTTTGCCATGCATGAGAACACGCAGAGGACTTGTACATCTGTTGCTGACTTGTTGACTTTGGATTATGACGCAGAAAGTGAATACCAAATGTTTCCAGGGGAAGAAATCACAATTGGTAAAGGCTACTCAAGCATAATCGAATCGTTAGCATCTGTGCTACCACCTGGTTCAGTTCAGTTGGGAAGAAAAGTCACAAGAATTGAATGGCAACCCGAGAGACAGGAGGCGATGAATATGGAAAATGGAACATGTTCTAGGCCCGTGGTGCTACATTTCTCTGATGGCTCTATTATGTCTGCGGATCATGTCATTGTCACGGTTTCACTGGGAGTGTTGAAGGCTTCAATCCGTGATAATGATTCAGGTATGTCAATGTTCCATCCCCCTCTACCCGCCTTTAAGGTTGAGGCTATTTCAAGGCTTGGTTTTGGTGTTGTTAACAAGTTGTTCATGCAATTGAGTCCTCCTCATGGAGGGTTCCCCTTCTTGCAAATGGTTTTCCATTCACCTAACTCTGAATTGAGGCAGAAGAAAATACCCTGGTGGATGAGAAGGACTGCTACTCTTTGTCCTATCTACAAAAATTCCAGTGTCCTCTTATCTTGGTTTGCCGGGGAAGAAGCTCTGGCACTCGAGTCTCTCAAAGATGAAGAGATCATTAAAGGGGTTTCAGACACAGTTTCATGTTTCCTGTCACAGTCAGTTGAGTTTTGCAACGGGAATGTGAATTCTGAAAAGCACTCCCACGAATATAAGGTTAAATTCAGTAAAGTGTTGAAGAGCCAATGGGGAAAAGATCCTTTATTTTTAGGTTCATACAGTCATGTGGCAGTTGGATCAAGTGGAGATGATTTTGATAAAATGGCAGAACCTTTGCCAAAATGCAGCAGCAGCAGCCAGCTTTCTGCTTCACCACCACTTCAAATCTTGTTTGCAGGGGAAGCAACCCACAGAACCCATTATTCCACAACTCATGGAGCTTACTTCAGTGGTCTTAGGGAAGCCAATAGGCTTATTCAACATTATTCACCCTGTTAA 1587 0.4505 MAVKKARIVIVGAGMAGITAANRLHSVSASKNLFEVCVVEGGNRIGGRINTSEFGGDRIEMGATWIHGIEGSPIHKIAQQIHALESQQPWECMDGNDNKATTIAEGGFVLNPSFVHPITELFNNLMDHAQGKMSTATTKGESGILSIGSFLRQGLAAYWDSSKEEKELKGFGKWSRKLLDEAIFAMHENTQRTCTSVADLLTLDYDAESEYQMFPGEEITIGKGYSSIIESLASVLPPGSVQLGRKVTRIEWQPERQEAMNMENGTCSRPVVLHFSDGSIMSADHVIVTVSLGVLKASIRDNDSGMSMFHPPLPAFKVEAISRLGFGVVNKLFMQLSPPHGGFPFLQMVFHSPNSELRQKKIPWWMRRTATLCPIYKNSSVLLSWFAGEEALALESLKDEEIIKGVSDTVSCFLSQSVEFCNGNVNSEKHSHEYKVKFSKVLKSQWGKDPLFLGSYSHVAVGSSGDDFDKMAEPLPKCSSSSQLSASPPLQILFAGEATHRTHYSTTHGAYFSGLREANRLIQHYSPC* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2562 528 SUPERFAMILY FAD-linked reductases, C-terminal domain 325 458 - -
Vra7g2562 528 PANTHER FLAVIN MONOAMINE OXIDASE 1 525 - -
Vra7g2562 528 Gene3D - 94 464 - -
Vra7g2562 528 Gene3D - 8 520 IPR036188 -
Vra7g2562 528 Pfam Flavin containing amine oxidoreductase 15 522 IPR002937 GO:0016491
Vra7g2562 528 PANTHER POLYAMINE OXIDASE 5-RELATED 1 525 - -
Vra7g2562 528 SUPERFAMILY FAD/NAD(P)-binding domain 1 525 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2562 Vra-Chr7 45935095 45937004 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2562 K12259 - gmx:100809633 910.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2562 7 45935095 45937004 Vra7g2562 7 45935095 45937004 ECH
Vra7g2562 7 45935095 45937004 Vra5g0310 5 2952754 2955545 PCT