Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2544 ATGTTCAATTTCTTACTTAGAAAAGACGAACGAAAGATTCTCAAGCGCAAAGATAGCGATGCTGGGGAAAGAGGAAGAGCACTGGAAGACCTGAGAGGCTCATTGTTTAATGAATTTCGTTCCCCTGAAGGTGCAAAACGACATCAACATCGTACATGTGGTCCAGCTGCAGCACTTGCCTTCAATTTTGTAGTAGCAATTAGTATTATCTTCATGAACAAAATGGTTCTTCAAACTGTTAAATTCAAATTCCCTATTCTTCTCTCACTAATTCACTACGCAGTGAGCTGGTTCTTAATGGCTATACTAAATGTGTTCTCTTTGCTTCCTGCTTGTCCTTCCTCAAAATCAACTAAGCTGTCTGCTTTATTTACTCTTGGATTTGTCATGTCTCTATCTACTGGCCTTGCTAATGTCAGTTTGAAGTATAATAGTATTGGTTTCTATCAGATGGCAAAGATTGCAGTAACACCTTCAATAGTTATGGCAGAATTTGTATTGTATAGGAAGAAAGTTTCTTGGCCCAAGGCTTTAGCATTAACGGTAGTATCTATTGGTGTTGCTGTGGCTACAGTGACAGATCTGCAGTTCCATTTCTTTGGTGCCTGTGTTGCATTAGCGTGGATTGTACCTAGTGCTATAAACAAAATCCTCTGGTCCAGATTGCAGCAGCTAGAAAACTGGACTGCTTTGGCGTTAATGTGGAAAACAACACCTATTACTTTAATTTTTCTGGCTGCTATGTTACCCTGCTTAGACCCTCCTGGTGTACTTTCCTTTGATTGGAACTTCATTAACACATTGGTGATACTCACATCAGCCATTCTCGGCTTTTTGCTTCAGTTATCTGGGGCCTTAGCACTAGGGTAA 870 0.4023 MFNFLLRKDERKILKRKDSDAGERGRALEDLRGSLFNEFRSPEGAKRHQHRTCGPAAALAFNFVVAISIIFMNKMVLQTVKFKFPILLSLIHYAVSWFLMAILNVFSLLPACPSSKSTKLSALFTLGFVMSLSTGLANVSLKYNSIGFYQMAKIAVTPSIVMAEFVLYRKKVSWPKALALTVVSIGVAVATVTDLQFHFFGACVALAWIVPSAINKILWSRLQQLENWTALALMWKTTPITLIFLAAMLPCLDPPGVLSFDWNFINTLVILTSAILGFLLQLSGALALG* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2544 289 Pfam Triose-phosphate Transporter family 60 246 IPR004853 -
Vra7g2544 289 PANTHER SOLUTE CARRIER FAMILY 35 14 289 - -
Vra7g2544 289 PANTHER NUCLEOTIDE-SUGAR TRANSPORTER FAMILY PROTEIN 14 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2544 Vra-Chr7 45768927 45772386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2544 67 283 Organic Solute Cotransporters AT1G77610 26.339 2.55e-18 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2544 - - vra:106767484 568.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2544 7 45768927 45772386 Vra7g2544 7 45768927 45772386 ECH
Vra7g2544 7 45768927 45772386 Vra5g0324 5 3114511 3119242 PCT