Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0324 ATGTTTAGCTTCTTCATCAGGAAAGGCGTCAGAAAGATCCTTAAGCGCAAAGACAGCGATGCTGGCGAAAAAGGAAGAGCTTTGGAAGATGTGAGAGCTTCTCTTTTTAATCAATTCCGTTCCTCCGAAGGTGCAAAGCGTCAACAGCAACGCATATGTGGTCCAGCTGTTGCACTTTCCTTCAATTTTCTGGTTGCAGTTGGTATTATTTTCATGAACAAAATGGTGCTTCAAACTGTTAAATTCAAATTTCCTATACTTCTTACACTAATTCACTATGTAGTGAGCTGGTTCTTCATGGCATTACTAAAAGCATTTTCTCTCCTTCCGGCTTCTCCTTCCTCAAAATCAACTCCATTGTCTACTTTATTTACTCTTGGATTTGTTATGTCTCTGTCCACGGGCTTTGCTAACGTCAGCTTGAAGTACAATAGCATTGGTTTCTATCAGATGGCAAAGATTGCAGTGACACCATCAATAGTTTTTGCAGAATTTGTATTATATAGGAAGAAAGTTTCTTTCCCAAAGGCATTAGCATTATCGGTGGTCTCTATTGGTGTTGCTGTGGCAACTGTGACTGATCTTCAGTTCCATGTATTTGGTGCTTGTGTAGCATTGGCATGGATTGTTCCAAGTGCTGTAAACAAAATCTTGTGGTCTAGGCTGCAGCAGCAAGAGAACTGGACTGCTTTGTCGCTAATGTGGAAAACCACACCCATTACTTTGATTTTCCTGGCTGCTATGTTACCCTGCTTAGACCCACCTGGTGTTCTTTCCTTTGACTGGAACTTCAGCAATAGTTTGGTAATTTTTGCATCAGCTATCCTTGGATTCTTACTTCAGTGGTCTGGTGCTTTAGCACTTGGGGCTACATCCGCCATCTCCCACGTTGTCCTTGGACAATTCAAGACCTGTGTCCTCCTTCTAGGAAACTATTATCTCTTTGGATCCAATCCTGGCAAAATCAGTATCTGTGGCGCTTTCATGGCTATTGCCGGTATGTCTATTTACACTTATCTTAATATTAGGCAACAATCAAACAAGCCATCACCTCGACAGGCTTCCATTTTACCAAAATCTAAACTCAGCAAAGAAAATGGCAGCACCCATGATGGACATTATGGTGCAGAATCTGTCTAA 1140 0.4158 MFSFFIRKGVRKILKRKDSDAGEKGRALEDVRASLFNQFRSSEGAKRQQQRICGPAVALSFNFLVAVGIIFMNKMVLQTVKFKFPILLTLIHYVVSWFFMALLKAFSLLPASPSSKSTPLSTLFTLGFVMSLSTGFANVSLKYNSIGFYQMAKIAVTPSIVFAEFVLYRKKVSFPKALALSVVSIGVAVATVTDLQFHVFGACVALAWIVPSAVNKILWSRLQQQENWTALSLMWKTTPITLIFLAAMLPCLDPPGVLSFDWNFSNSLVIFASAILGFLLQWSGALALGATSAISHVVLGQFKTCVLLLGNYYLFGSNPGKISICGAFMAIAGMSIYTYLNIRQQSNKPSPRQASILPKSKLSKENGSTHDGHYGAESV* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0324 379 PANTHER SOLUTE CARRIER FAMILY 35 15 356 - -
Vra5g0324 379 MobiDBLite consensus disorder prediction 348 379 - -
Vra5g0324 379 MobiDBLite consensus disorder prediction 348 363 - -
Vra5g0324 379 Pfam Triose-phosphate Transporter family 62 337 IPR004853 -
Vra5g0324 379 PANTHER NUCLEOTIDE-SUGAR TRANSPORTER FAMILY PROTEIN 15 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0324 Vra-Chr5 3114511 3119242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0324 67 363 Organic Solute Cotransporters AT1G21870 23.127 2.06e-23 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0324 - - gmx:100777499 690.649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2544 7 45768927 45772386 Vra5g0324 5 3114511 3119242 PCT